Pairwise Alignments

Query, 653 a.a., 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase from Vibrio cholerae E7946 ATCC 55056

Subject, 623 a.a., 2',3'-cyclic-nucleotide 2'-phosphodiesterase CpdB from Phaeobacter inhibens DSM 17395

 Score =  314 bits (804), Expect = 9e-90
 Identities = 211/600 (35%), Positives = 312/600 (52%), Gaps = 52/600 (8%)

Query: 19  MAGPVMADTIK---LRIVETTDIHTNLMDYDYYKDKASDQIGLTRAATLVKQARAE-VEN 74
           M G   A+  K   LRI+ TTD+H NL+ +DYY DK     GL+R ATL+ QAR E VEN
Sbjct: 1   MTGSDQAEDSKVGSLRILATTDLHANLLSHDYYSDKPDPAQGLSRVATLIAQARHEAVEN 60

Query: 75  ---SVLVDNGDLIQGSPMGDYMAAKGIKAGEVHP--VYKAMNPLGYDVGNIGNHEFNYGL 129
              ++L+DNGD I G+P+    A + ++  ++ P  V +A + L YD   +GNH+F++GL
Sbjct: 61  GAVTLLLDNGDSIFGTPI----AERPLELSDIRPAPVARAFDLLSYDAIGLGNHDFDFGL 116

Query: 130 EFLKETINDAAFPYINANVFDAKTGQHL-FTPYVIKEHSFKDTDGEAHTIKVGYIGFVPP 188
           + L++ +   + P + +N+        L F    + E +  DT G    +++G I  +P 
Sbjct: 117 DQLRQALLRISCPVLCSNMRALDPQLSLPFCQSTVLERALPDTSGTP-PLRIGLISVLPM 175

Query: 189 QIMVWDKKNLEGKVTAADIKQTAEKLIPEMKAKGADVIVAIPHSGISTDEYQAGAENSVY 248
           Q + W    L+GKVT  D+ Q+A      ++ +G DVIVA+ H+GI       G EN+++
Sbjct: 176 QTLKWAAHQLQGKVTIDDMVQSARDHAAALREQGCDVIVALAHTGIGEGHATYGIENALH 235

Query: 249 YLTQVKGIDAIAFGHSHAVFPGKDFANVPGADIDKGTINGVTAVMPGRWGSHVGVMDLTL 308
            L  +  +DAI  GH+H   P            D         VMPG  GSH+GV+DL +
Sbjct: 236 QLANLGVLDAIVGGHTHLTLP------------DPRHPVSAPVVMPGAHGSHLGVIDLRM 283

Query: 309 EKQQGRWAVTSGQSEARPIFDKAN-------KKALVEADATMVQALQHDHQGTRDFVNQP 361
                RWAVT      RPI  +            LV+ D  MV AL  DH  TR  + QP
Sbjct: 284 TWNSDRWAVTKATCTLRPIARRRTIGGAGGVLTPLVDEDPAMVAALAEDHAETRTRMAQP 343

Query: 362 IGKANDVMYSFLSLVQDDPTVQIVNLAQKDYVERFIQGDPNLDGLPVLSAAAPFKAGGRK 421
           +G+ +  ++S+ + +  D  + +V  AQ   V   +  D     LP+LSA AP K G R 
Sbjct: 344 VGRTSQPLHSYFTFLGRDQALALVAWAQAAAVRPALT-DTLASNLPLLSATAPGKFGAR- 401

Query: 422 DDPNGFTEVEAGELTFRNAADLYLYPNTLVTMKVSGQQLKEWLECSAGQFNQIDVTSSAP 481
             P+ +T+V  G++  R+  D+  +PN L T+ + G QL++WLE SAG FNQI    +  
Sbjct: 402 SGPSNYTDVPIGQMYMRHVVDIQPFPNELRTVVLDGAQLRDWLEMSAGLFNQI-APGTFG 460

Query: 482 QSLINWDGFRTYNFDVIDGVNYQIDVTQPARYDGDCKLINPNSQRIVQLTYQGKPIDTQQ 541
             L++ D    +NFDVI GV Y IDV+ PAR+  D +L NP+S RI  L ++G P+   Q
Sbjct: 461 SPLLD-DDRAGHNFDVIFGVQYDIDVSAPARFASDGELANPDSYRIRNLRWKGAPVRDSQ 519

Query: 542 TFLIATNNYRAYSNKFPGTGAEFVAFDS-------PDENRTVVADYIA-RVSKDKGEVTP 593
            F +A ++YR       G G  F    +       P   R  + DY+A R+ +D  E  P
Sbjct: 520 HFAVAVSSYRI------GGGGNFAMAQAATPLPIPPLRVRDAIRDYVAGRLDRDPLEHAP 573