Pairwise Alignments

Query, 653 a.a., 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase from Vibrio cholerae E7946 ATCC 55056

Subject, 652 a.a., 2',3'-cyclic-nucleotide 2'-phosphodiesterase CpdB from Phaeobacter inhibens DSM 17395

 Score =  572 bits (1474), Expect = e-167
 Identities = 305/655 (46%), Positives = 419/655 (63%), Gaps = 26/655 (3%)

Query: 10  LAVLGGLLAM---AGPVMADTIKLRIVETTDIHTNLMDYDYYKDKASDQIGLTRAATLVK 66
           LA   GL+A+   +    ++ + LR++ETTD+H ++  YDYY DK  D +GL R A+L+ 
Sbjct: 11  LAGSAGLIALHPFSVQAASNQVHLRLMETTDLHVHVFPYDYYADKPRDTVGLARTASLIG 70

Query: 67  QARAEVENSVLVDNGDLIQGSPMGDYMA-AKGIKAGEVHPVYKAMNPLGYDVGNIGNHEF 125
             RAE  NS+L+DNGD +QG+PMGDY+A  +G+K G+ HPV +AMN +G+D   +GNHEF
Sbjct: 71  DIRAEATNSLLLDNGDFLQGNPMGDYIAYERGMKEGDTHPVIQAMNAVGFDGSTLGNHEF 130

Query: 126 NYGLEFLKETINDAAFPYINANVFDA-----KTGQHLFTPYVIKEHSFKDTDGEAHTIKV 180
           NYGL+FL +++  A FP + ANV  +     +    L  PYVI E    D  G  H IK+
Sbjct: 131 NYGLDFLMKSLAGADFPVVCANVAKSTGAGPRDDTTLLPPYVILERELTDGAGNTHPIKI 190

Query: 181 GYIGFVPPQIMVWDKKNLEGKVTAADIKQTAEKLIPEMKAKGADVIVAIPHSGISTDEYQ 240
           G IGFVPPQ+M WD+++LEG V A DI +TA   +PEMK KGAD+I+A+ HSGI + +  
Sbjct: 191 GLIGFVPPQVMNWDRRHLEGNVQARDILETARAYVPEMKEKGADIIIALSHSGIGSAQEV 250

Query: 241 AGAENSVYYLTQVKGIDAIAFGHSHAVFPGKDFANVPGADIDKGTINGVTAVMPGRWGSH 300
            G EN+   L  V+GIDAI  GHSH VFP   +A+  G D+DKGTI+G  A M G WGSH
Sbjct: 251 DGMENASVPLAAVEGIDAIMTGHSHLVFPSSTYADFAGVDVDKGTIHGTPATMGGFWGSH 310

Query: 301 VGVMDLTLEKQQGRWAVTSGQSEARPIFDKANKK---ALVEADATMVQALQHDHQGTRDF 357
           +G++DL LE+    W V    SEARPI  +   +   ALVE+   ++ A Q +H  T  +
Sbjct: 311 MGLIDLMLERDGSGWRVVGHASEARPISQREEDRSITALVESAPAVLAAAQKEHDETLQY 370

Query: 358 VNQPIGKANDVMYSFLSLVQDDPTVQIVNLAQKDYVERFIQGDPNLDGLPVLSAAAPFKA 417
           V + +GK +  ++S+ +LV DDP+VQIV++AQ  Y+E+ ++G  + +GLP+LSAAAPFKA
Sbjct: 371 VRRAVGKTDAPLHSYFALVADDPSVQIVSIAQTWYIEQMLKGTEH-EGLPILSAAAPFKA 429

Query: 418 GGRKDDPNGFTEVEAGELTFRNAADLYLYPNTLVTMKVSGQQLKEWLECSAGQFNQIDVT 477
           GGR      +T+V  G++  +N ADLYLYPNT   ++V+G Q+K+WLE SAG FNQI   
Sbjct: 430 GGR-GGAEYYTDVPKGDVAIKNVADLYLYPNTARAVRVTGAQVKDWLERSAGMFNQI-TP 487

Query: 478 SSAPQSLINWDGFRTYNFDVIDGVNYQIDVTQPARYDGDCKLINPNSQRIVQLTYQGKPI 537
            +A Q L+N   F +YNFDVIDGV YQID++QP+++     L NP++ RIV L + G PI
Sbjct: 488 GAADQVLLN-PAFPSYNFDVIDGVTYQIDLSQPSKFGPKGALENPDANRIVNLEFDGAPI 546

Query: 538 DTQQTFLIATNNYRA-YSNKFPGTGAEFVAFDSPDENRTVVADYIARVSKDKGEVTPSAD 596
           D  Q F+IATNNYRA     FPG   + V F+ PD NR V+  YI     +KG ++P AD
Sbjct: 547 DPAQEFIIATNNYRAGGGGAFPGAMGDTVVFEGPDTNRDVIVRYIV----EKGTISPRAD 602

Query: 597 NNWSFAPISSKTKLDIRFETSPSDKATQFIKQKGQYPMTRVASDDVGFAVYRIDL 651
            NW FAP++  + L   F+T P  KA  ++       +        GFA YRI L
Sbjct: 603 ANWRFAPLADTSVL---FDTGP--KAAAYVDSVESIAIEPAGEGPDGFARYRISL 652