Pairwise Alignments

Query, 653 a.a., 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase from Vibrio cholerae E7946 ATCC 55056

Subject, 685 a.a., 2',3'-cyclic-nucleotide 2'-phosphodiesterase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  719 bits (1857), Expect = 0.0
 Identities = 361/652 (55%), Positives = 467/652 (71%), Gaps = 30/652 (4%)

Query: 30  LRIVETTDIHTNLMDYDYYKDKASDQIGLTRAATLVKQARAEVENSVLVDNGDLIQGSPM 89
           LR++ETTD+HTN+MD++YY  K    IGL R A+L+  AR+E +NSVLVDNGDL+QGSPM
Sbjct: 32  LRVLETTDLHTNIMDFNYYSGKVDPTIGLVRTASLIHAARSESKNSVLVDNGDLLQGSPM 91

Query: 90  GDYMAAKGIKAGEVHPVYKAMNPLGYDVGNIGNHEFNYGLEFLKETINDAAFPYINANVF 149
           GDYMA  G++ G+VHP YKAMN L Y+VGNIGNHEFNYGL+FL ++++ A FPYINANV+
Sbjct: 92  GDYMAKVGLQMGDVHPAYKAMNLLDYEVGNIGNHEFNYGLDFLNKSLHGAKFPYINANVY 151

Query: 150 DA---------KTGQHLFTPYVIKEHSFKDTDGEAHTIKVGYIGFVPPQIMVWDKKNLEG 200
            A         K G+HLFTPY+IKE    D++G   TIK+GYIGFVPPQI++WDK+NL G
Sbjct: 152 CADDDGCWNGVKKGEHLFTPYIIKEKQIIDSEGNNQTIKIGYIGFVPPQILLWDKQNLTG 211

Query: 201 KVTAADIKQTAEKLIPEMKAKGADVIVAIPHSGISTDEYQAG--AENSVYYLTQVKGIDA 258
           KVT  DI  TA+K +PEMKAKGAD+I+AIPHSGI + E      AEN+ Y LT VK I+A
Sbjct: 212 KVTVEDIVATAKKYVPEMKAKGADLIIAIPHSGIGSTENPGDPMAENATYALTNVKDINA 271

Query: 259 IAFGHSHAVFPGKDFANVPGADIDKGTINGVTAVMPGRWGSHVGVMDLTLEKQQGRWAVT 318
           I FGHSH++FP   +A++P  D+ KG +NGV AVMPGRWG ++GV+D  LE++ G+W+V 
Sbjct: 272 IMFGHSHSIFPDAKYADLPNTDVTKGLLNGVPAVMPGRWGDNLGVVDFKLERKDGKWSVL 331

Query: 319 SGQSEARPIFDKANKKALVEADATMVQALQHDHQGTRDFVNQPIGKANDVMYSFLSLVQD 378
           S  ++ARPI+D A K  LVE D  ++ A+  +HQGT  FV+QPIG A   MYSFL+LVQD
Sbjct: 332 SASTKARPIYDGATKTPLVERDQEIIDAVAAEHQGTLTFVDQPIGIAAADMYSFLTLVQD 391

Query: 379 DPTVQIVNLAQKDYVERFIQGDPNLDGLPVLSAAAPFKAGGR---KDDPNGFTEVEAGEL 435
           DPTVQIV+ AQ   V+  +     L  LPVLSA+APFKAGGR     D + + +V+ G L
Sbjct: 392 DPTVQIVSDAQIANVKAKL--PEALKNLPVLSASAPFKAGGRHGTTSDADQYVQVDKGAL 449

Query: 436 TFRNAADLYLYPNTLVTMKVSGQQLKEWLECSAGQFNQIDVTSSAPQSLINWDGFRTYNF 495
           TF+NAADLYLYPNT+V +K +G +LK+WLECSA QF QID T +APQ LINWDG  TYNF
Sbjct: 450 TFKNAADLYLYPNTMVAVKATGAELKDWLECSANQFKQIDPTQTAPQELINWDGHPTYNF 509

Query: 496 DVIDGVNYQIDVTQPARYDGDCKLINPNSQRIVQLTY---QGKPIDTQQ----TFLIATN 548
           DV+DG+ Y+IDVTQP+++D DC ++N ++ RIV L Y    GK    ++     F++A+N
Sbjct: 510 DVLDGLTYKIDVTQPSKFDRDCAVVNASANRIVDLRYTDENGKVFTGEEFAAKEFIVASN 569

Query: 549 NYRAYSNKFPGTGAEFVAFDSPDENRTVVADYIARVS-------KDKGEVTPSADNNWSF 601
           NYRA+  KF GTG++ V  + PD NR  +A YI   S       K +G V PSAD NW F
Sbjct: 570 NYRAFGGKFAGTGSDHVVLELPDTNREALAAYITAQSKYNEATGKYEGMVNPSADYNWDF 629

Query: 602 APISSKTKLDIRFETSPSDKATQFIKQKGQYPMTRVASDDVGFAVYRIDLQK 653
             I++   LDIRF+T  SDKA  FI+   Q  M +++ D++GFAVY I+L +
Sbjct: 630 KTINTNVTLDIRFQTQDSDKAATFIEANKQREMKKISKDELGFAVYSINLSQ 681