Pairwise Alignments

Query, 299 a.a., TIGR03899 family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 279 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  169 bits (429), Expect = 5e-47
 Identities = 92/256 (35%), Positives = 147/256 (57%), Gaps = 1/256 (0%)

Query: 33  RILVIARHHGLDAQLLTESPENSALERAVHRERQRKEQRQKNLEQIIKLAHSSCRNESAG 92
           + L++ R  GL ++        S  ERA HRER+   Q Q N+E I  LA S   ++  G
Sbjct: 24  KALLLGRQLGLASEEEYRPANASIAERAQHRERKLASQYQANVETIFALALSYTSSDMTG 83

Query: 93  -DPDQDWLYRFFDMAQDIHNSSMQRLWAQVLKREVTNPGFTSMKALKVLQDMTPKEAQIL 151
            D D DW ++FF MA+ IHN  MQ LWA++L  E+ NPG  S++ L +L+ +T +EAQIL
Sbjct: 84  VDLDPDWSHQFFLMAEQIHNRRMQDLWARILSSEIINPGNFSLRTLALLKQLTHREAQIL 143

Query: 152 QRAAALACSFGSDTSLKLLIGYKAQNSLFSLGKRITTQAINIGNHQLPYSSLLVLIELGL 211
           ++A  +A    ++  LKL+ GY+    L    ++ T+  + +    LPYSS+L L++ G+
Sbjct: 144 EKALGMAAKVNNEQRLKLISGYRLTGGLGQYFRKHTSITLGLSQFGLPYSSILTLVDAGI 203

Query: 212 LHATELESGEIEAEPALLLSYQGKNLHLQPTSKGVRLIYYRFSPTGNELCRLLGNKPNMT 271
           LH++E E+G +  +  + L+  G  + L P S  +   YYR +P G+EL +L+  K +  
Sbjct: 204 LHSSEFETGLLNNKTPIQLTMPGIQMRLTPKSGNLLFSYYRLTPIGDELAQLVLPKQDEE 263

Query: 272 YYDQLVALLTQKFTVQ 287
           Y   L AL ++ F ++
Sbjct: 264 YLKALQALFSKDFKIE 279