Pairwise Alignments

Query, 419 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 421 a.a., ABC-type transport system, involved in lipoprotein release, permease component from Pseudomonas stutzeri RCH2

 Score =  503 bits (1294), Expect = e-147
 Identities = 252/419 (60%), Positives = 325/419 (77%), Gaps = 3/419 (0%)

Query: 4   ILNLAWKSLLNRKATALLTVLTVAIAVVLLLGVERIRTQAKESFANTISGTDLIVGGRSG 63
           +L LA  SL NR+ TALLTV  +A++V LLL VER+R + + SFANTISGTDL+VG RSG
Sbjct: 3   LLRLALASLNNRRFTALLTVFAIALSVCLLLAVERVRNETRASFANTISGTDLVVGARSG 62

Query: 64  QVNLLLYSVFRIGNATNNIDWKSYQEFSQHPAVKWAIPISLGDSHKGFRVLGTNHSYFEH 123
            VNLLLYSVFRIGNATNNI W SYQ F++HP V WAIPISLGDSH+G+RV+GT+ +YFEH
Sbjct: 63  SVNLLLYSVFRIGNATNNIRWDSYQRFAEHPRVDWAIPISLGDSHRGYRVMGTSTNYFEH 122

Query: 124 YRYGSKQPLTLSQGREFNG-LFETVIGADVAQALGYQVGSQIIIAHGISDVGFSRHDNLP 182
           YRYG KQPL L++GR F    FE V+GA+VA ALGYQ+   I++AHG++ V   +H++ P
Sbjct: 123 YRYGRKQPLQLAEGRAFESDPFEVVLGAEVASALGYQLDDSIVLAHGVARVSLVQHEDKP 182

Query: 183 FTVVGILAPTGTPVDKTVHVSLEAIEAIHVGWESG--ANLGHQPSAEQLAQRDFTPKQIT 240
           F VVG+L  TGTPVD+T+H+SLE +EA+HV W++G  A    +  AEQ  Q D  P+QIT
Sbjct: 183 FRVVGVLQRTGTPVDRTLHISLEGMEALHVDWQNGMPARGAARIDAEQARQLDLQPQQIT 242

Query: 241 AMLVGLKSKIQTFALQRQINDYPQEPLSAIMPGVALHELWGMMSVAEQALMAVSVFVVVA 300
           A L+GL SKI TF LQR+IN+Y  EPL AI+PGVAL ELW +M  AE+AL  VS+FVV+ 
Sbjct: 243 AFLLGLNSKIATFTLQREINEYRGEPLLAILPGVALQELWSLMGTAEKALFVVSLFVVLT 302

Query: 301 GLLGMLSSLLTSLQERRREMSILRAMGARPQHVFALLVSEASVLTLVGILLGVSVLYLLL 360
           GL+GML+++LTSL ERRREM+ILR++GARP H+ ALL+ EA  L L G LLG+++LYL +
Sbjct: 303 GLIGMLTAILTSLNERRREMAILRSVGARPWHIAALLIIEAFGLALAGTLLGLALLYLGI 362

Query: 361 ALAAPLIASQYGIQIALAGLTAYEWQLLGCVQLAGIVIGFIPALRAYRQSLSDGMTIRL 419
           A+A   + S YG+ + LA  ++YEW LLG + LA +++G +PA RAYRQSL+DG++IRL
Sbjct: 363 AVAQSPLQSLYGLYLPLAWPSSYEWSLLGAILLAALLMGSVPAWRAYRQSLADGLSIRL 421