Pairwise Alignments

Query, 419 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 421 a.a., Protein of unknown function DUF214 from Pseudomonas syringae pv. syringae B728a

 Score =  474 bits (1219), Expect = e-138
 Identities = 228/419 (54%), Positives = 317/419 (75%), Gaps = 3/419 (0%)

Query: 4   ILNLAWKSLLNRKATALLTVLTVAIAVVLLLGVERIRTQAKESFANTISGTDLIVGGRSG 63
           +  LA  SL NR+ TA LT   +A++V LLL VER+RT+A+ SFA+TISGTDLIVG RSG
Sbjct: 3   LFRLAMASLANRRFTAFLTAFAIALSVCLLLAVERVRTEARSSFASTISGTDLIVGARSG 62

Query: 64  QVNLLLYSVFRIGNATNNIDWKSYQEFSQHPAVKWAIPISLGDSHKGFRVLGTNHSYFEH 123
            +NLLLYSVFRIGNATNNI W S++ F+    VKWAIP+SLGDSH+G+RV+GTN +YFEH
Sbjct: 63  SINLLLYSVFRIGNATNNIRWDSFEHFANSKQVKWAIPVSLGDSHRGYRVMGTNEAYFEH 122

Query: 124 YRYGSKQPLTLSQGREFN-GLFETVIGADVAQALGYQVGSQIIIAHGISDVGFSRHDNLP 182
           Y++G +Q L +++GREF    FE V+G++VA+AL Y++G ++++AHG++ +   +HD+ P
Sbjct: 123 YQFGRQQHLEMAEGREFKTDPFEVVLGSEVAKALHYKLGDKLVLAHGVAAISLVKHDDKP 182

Query: 183 FTVVGILAPTGTPVDKTVHVSLEAIEAIHVGWESGANL--GHQPSAEQLAQRDFTPKQIT 240
           FTVVGIL PTGTPVD+T+H+SL  +EAIH+ W +GA      + SA+Q    D TP  IT
Sbjct: 183 FTVVGILKPTGTPVDRTLHISLGGMEAIHIDWHNGAPARGSERISADQARNMDLTPTAIT 242

Query: 241 AMLVGLKSKIQTFALQRQINDYPQEPLSAIMPGVALHELWGMMSVAEQALMAVSVFVVVA 300
           A ++GL SKI TF+LQR+IN+Y  EP+ AI+PGVAL ELW +M  AE+AL  +S+FVV+ 
Sbjct: 243 AFMLGLNSKISTFSLQREINEYRGEPMLAILPGVALQELWSLMGTAEKALFVISLFVVLT 302

Query: 301 GLLGMLSSLLTSLQERRREMSILRAMGARPQHVFALLVSEASVLTLVGILLGVSVLYLLL 360
           GL+GML+++LTSL ERRREM+ILR++GARP H+ +LL+ EA  L L G++ G+++LY+ +
Sbjct: 303 GLIGMLTAILTSLNERRREMAILRSVGARPWHIASLLILEAFALALAGVISGLALLYIGI 362

Query: 361 ALAAPLIASQYGIQIALAGLTAYEWQLLGCVQLAGIVIGFIPALRAYRQSLSDGMTIRL 419
            +A   +   YG+ ++      YEW LLG +    +++G +PA RAYRQSL+DG++IRL
Sbjct: 363 FVARDYVLDNYGLYLSSMPPGQYEWTLLGAILGCALLMGTVPAWRAYRQSLADGLSIRL 421