Pairwise Alignments

Query, 419 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 657 a.a., ABC transporter:Protein of unknown function DUF214 from Pseudomonas syringae pv. syringae B728a

 Score = 70.9 bits (172), Expect = 1e-16
 Identities = 107/429 (24%), Positives = 184/429 (42%), Gaps = 76/429 (17%)

Query: 5   LNLAWKSL-LNRKATALLTVLTVAI---AVVLLLGV-----ERIRTQAKESFANTISGTD 55
           +  AW+ + +NR  TAL T+L + I   +VV++L V      ++  Q     +N I    
Sbjct: 270 IRAAWRVMWINRFRTAL-TLLGIVIGVASVVVMLAVGEGSKRQVMAQMSSFGSNIIYLNG 328

Query: 56  LIVGGRSGQVNLLLYSVFRIGNATNNIDWKSYQEFSQHPAVKWAIPISLGDSHKGFRVLG 115
                R+ +  + L  V  +G                 P VK  +P++ G +  G R   
Sbjct: 329 KAPNPRAPKGVITLEEVAALGEL---------------PEVKMIMPVNGGQA--GVRYGN 371

Query: 116 TNHSYF-----EHYRYGSKQPLT----LSQGREFNGLFETVIGADVAQAL-GYQ---VGS 162
            +HS +      H+      P+      S+  E N     VIG  V Q L G Q   VG 
Sbjct: 372 LDHSSYVGGNDTHFPAIFNWPVVEGSYFSEADEQNAAAVAVIGYKVRQKLFGEQSDPVGQ 431

Query: 163 QIIIAHGISDVGFSRHDNLPFTVVGILAPTGTPVDKTVHVSLEAIEAIHVGWESGAN--L 220
            I+I            +N+PF VVG+L   G          L++   I + + S +    
Sbjct: 432 YILI------------ENVPFQVVGVLQEKGATSG-----DLDSDNRIAIPYSSASIRLF 474

Query: 221 GHQ-PSAEQLAQRDFTPKQITAMLVGLKSKIQTFALQRQINDYPQEPLSAIMPGVALHEL 279
           G Q P    +A RD     +      +++ +Q     +Q  DY     +A++   A  + 
Sbjct: 475 GTQDPEYITIATRD--ANNVKQAEQSIRNLLQQLHHGKQ--DYELTNNAAMIQAEARTQ- 529

Query: 280 WGMMSVAEQALMAVSVFVVVAGLLGMLSSLLTSLQERRREMSILRAMGARPQHVFALLVS 339
              +S+   ++ A+S+ V   G +G+++ +L +++ER RE+ I  A GAR   +    ++
Sbjct: 530 -NTLSLMLGSIAAISLLV---GGIGVMNIMLMTVRERTREIGIRMATGARQSDILRQFLT 585

Query: 340 EASVLTLVGILLGVSVLYLLLALAAPLIASQYGIQIALAGLTAYEWQLLGCVQLAGIVIG 399
           EA +L++VG L G+    L L + A L+ S+  +   L  +         C  + G++ G
Sbjct: 586 EAVMLSVVGGLAGI---VLALGMGAALLLSKVAVAFTLPAVAG----AFACALITGVIFG 638

Query: 400 FIPALRAYR 408
           F+PA +A R
Sbjct: 639 FMPARKAAR 647