Pairwise Alignments

Query, 419 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 647 a.a., transmembrane ATP-binding ABC transporter protein from Sinorhizobium meliloti 1021

 Score = 53.9 bits (128), Expect = 1e-11
 Identities = 60/246 (24%), Positives = 108/246 (43%), Gaps = 36/246 (14%)

Query: 184 TVVGILAPTGT-PVDKTVHVSLEAIEAIHVGWESGANLGHQPSAEQLAQRDFTPKQITAM 242
           TVV  L P G+ P+ + V V+    + I V    GA+ G     + +      P    +M
Sbjct: 407 TVVKTLFPEGSDPIGQYVLVNKIPFQVIGVMSGMGASAGGNDQDDVV----LVPLTTGSM 462

Query: 243 LVGLKSKIQTFALQRQ---INDYPQEPLSAIMPGVALHE---LWGMMSVAEQA------- 289
            +  +  I+T  ++ Q     D  QE + A++      +   +  M SV E         
Sbjct: 463 RLFGQRNIRTITVKVQDASAIDLTQERIQALLNERHRKDDTQITNMSSVREAFTETSNTM 522

Query: 290 ---LMAVSVFVVVAGLLGMLSSLLTSLQERRREMSILRAMGARPQHVFALLVSEASVLT- 345
              L +V+   ++ G +G+++ +L S+ ER RE+ +  A GAR + +    + EA V++ 
Sbjct: 523 KFFLGSVAAISLLVGGIGVMNIMLVSVSERTREIGVRMATGARERDILVQFIVEALVVSA 582

Query: 346 ---LVGILLGVSVLYLLLALAAPLIASQYGIQIALAGLTAYEWQLLGCVQLAGIVIGFIP 402
               +G++ G+S  Y   A   P+  +   + +A A           C  L G++ G++P
Sbjct: 583 IGGAIGVVAGLSTGYAAKAFGMPVSFTPGPVALAFA-----------CAFLTGLLFGYLP 631

Query: 403 ALRAYR 408
           A  A R
Sbjct: 632 ARNASR 637