Pairwise Alignments

Query, 419 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 420 a.a., Protein of unknown function DUF214 (NCBI) from Rhodospirillum rubrum S1H

 Score =  119 bits (298), Expect = 2e-31
 Identities = 117/432 (27%), Positives = 182/432 (42%), Gaps = 44/432 (10%)

Query: 4   ILNLAWKSLLNRKATALLTVLTVAIAVVLLLGVERIRTQAKESFANTISGTDLIVGGRSG 63
           +L   +  L  R+  A   V+ +A+A  L + V       +   A   +  DL++G    
Sbjct: 1   MLRFVFADLATRRWGAAALVVIIALATGLGVMVTLQERALRLGSARAAAAFDLVIGAPGS 60

Query: 64  QVNLLLYSVFRIGNATNNIDWKSYQEFSQHPAVKWAIPISLGDSHKGFRVLGTNHSYFEH 123
           +  L+L SVF        +      + +  P V +A P+  GD      ++GT       
Sbjct: 61  ETQLVLSSVFLQAAPLTLMPGNVLAKLAADPRVAYAAPVGFGDFVGDHPIVGTTLDLVSG 120

Query: 124 YRYGSKQPLTLSQGREFNGLFETVIGADVAQALGYQVGSQIIIAHGISDVGFSRHDNLPF 183
                     +++GR F  L E VIGA V  +LG Q+       HG ++ G   H  + +
Sbjct: 121 LG-------GVTEGRGFEKLSEAVIGAKVEISLGQQIQPM----HGHAEEGGEAHAGVSY 169

Query: 184 TVVGILAPTGTPVDKTVHVSLEAIEAIHVGWESGANLGHQPSAEQLAQR----------- 232
            VVG LA +GTP D+ V V +EA+  +H  W    +  H+      A             
Sbjct: 170 RVVGRLAASGTPWDRAVLVPIEAVWRVHGHWAPDHDHEHEEEHGHGADEHDHDHAGESDL 229

Query: 233 ----------DFTPKQITAMLVGLKSKIQTFALQRQINDYPQEPLSAIMPGVALHELWGM 282
                     D     + A+LV  +   + + L+++   Y   P  A+ P   L  L+G 
Sbjct: 230 DDPLRPEAIFDALAPGVPAILVKPRGIAEAYKLRQE---YRAAPTMAVFPAEVLTRLYGT 286

Query: 283 MSVAEQALMAVSVFVVVAGLLGMLSSLLTSLQERRREMSILRAMGARPQHVFALLVSEAS 342
           M  A + L  V+          +L  +   + +RRR++  LRA GA  + +FAL+  EA 
Sbjct: 287 MGDARRILAMVAAGAQALVGAAILLVITVEVLQRRRQIGALRAFGAPRRAIFALVWVEAF 346

Query: 343 VLTLVGILLGVSVLY-LLLALAAPLIASQYGIQIAL---AGLTAYEWQLLGCVQLAGIVI 398
            L L G+L G ++ Y   LALA  L  +  GI + +   AG   Y   LLG     G + 
Sbjct: 347 ALLLAGLLGGFALGYGGSLALARGLERTG-GIDLPVVFEAGDAVYGLILLG----VGALF 401

Query: 399 GFIPALRAYRQS 410
             +PA  AYRQS
Sbjct: 402 ALLPAALAYRQS 413