Pairwise Alignments

Query, 419 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 416 a.a., putative ABC transporter, permease protein from Phaeobacter inhibens DSM 17395

 Score =  448 bits (1153), Expect = e-130
 Identities = 227/417 (54%), Positives = 306/417 (73%), Gaps = 3/417 (0%)

Query: 3   VILNLAWKSLLNRKATALLTVLTVAIAVVLLLGVERIRTQAKESFANTISGTDLIVGGRS 62
           +IL LA  SL  R  T  +TVL +A++V L LGVE+IRT AK SFA+TISGTDLIVG RS
Sbjct: 1   MILRLAIASLFARALTVGMTVLAIALSVALFLGVEKIRTGAKASFADTISGTDLIVGARS 60

Query: 63  GQVNLLLYSVFRIGNATNNIDWKSYQEFSQHPAVKWAIPISLGDSHKGFRVLGTNHSYFE 122
           G V LLLYSVFRIGNATNN+ W+SYQ+ ++ P V W +PISLGDSH  FRV+GT  ++F+
Sbjct: 61  GSVQLLLYSVFRIGNATNNVTWESYQDIAKRPDVDWIVPISLGDSHHQFRVMGTTTAFFD 120

Query: 123 HYRYGSKQPLTLSQGREFNGLFETVIGADVAQALGYQVGSQIIIAHGISDVGFSRHDNLP 182
           HY+Y   +PL ++ G     LF+TVIGADVA  LGY VG  II+AHG++   F++H + P
Sbjct: 121 HYKYRQGRPLKMADGAPMEDLFDTVIGADVAGTLGYHVGDPIIVAHGLA--SFAKHKDQP 178

Query: 183 FTVVGILAPTGTPVDKTVHVSLEAIEAIHVGWESGANL-GHQPSAEQLAQRDFTPKQITA 241
           F V GIL  TGTPVD+TV VS++AIEAIHV W+SGA + G     + + + + TPK ITA
Sbjct: 179 FRVSGILEKTGTPVDRTVIVSMKAIEAIHVDWQSGAQIPGQSTPVDVIREMELTPKAITA 238

Query: 242 MLVGLKSKIQTFALQRQINDYPQEPLSAIMPGVALHELWGMMSVAEQALMAVSVFVVVAG 301
            L+G++S +QTFALQR IN+Y +EPL AI+PGVAL ELW ++ +AE AL+ VS  VVV  
Sbjct: 239 ALIGVESPLQTFALQRAINEYREEPLLAILPGVALQELWSIVGIAETALLTVSAMVVVTA 298

Query: 302 LLGMLSSLLTSLQERRREMSILRAMGARPQHVFALLVSEASVLTLVGILLGVSVLYLLLA 361
           L+GM++++ +SL ERRREM+I RAMGARP+ + +LLV EA ++  VG LLG+ +LY+ L 
Sbjct: 299 LIGMMATIFSSLNERRREMAIFRAMGARPRTILSLLVLEAMMMATVGALLGLVLLYIGLF 358

Query: 362 LAAPLIASQYGIQIALAGLTAYEWQLLGCVQLAGIVIGFIPALRAYRQSLSDGMTIR 418
           +A P++ S +G+ I +   T  E+ +L  V  AG+++  IPA+RAYR S++DGM ++
Sbjct: 359 VAQPILDSTFGLWIPIDTPTLREFWVLLAVICAGVIVSLIPAMRAYRMSVADGMVVK 415