Pairwise Alignments

Query, 419 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 417 a.a., lipoprotein releasing system, transmembrane protein, LolC/E family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 53.1 bits (126), Expect = 1e-11
 Identities = 91/436 (20%), Positives = 181/436 (41%), Gaps = 53/436 (12%)

Query: 1   MKVILNLAWKSLLNRKATALLTVLTVAIAVVLLLGVERIRTQAKESFANTISGTDLIVGG 60
           M   L +A + L  R+    ++V++V   + + LGV  +          T    D I+G 
Sbjct: 1   MSFELFVALRYLFARRRQTFISVISVTSILGVALGVASLIVVLGVMNGFTTDLRDKILGA 60

Query: 61  RSGQVNLLLYSVFRIGNATNNIDWKSYQEFSQHPAVKWAIP-----ISLGDSH--KGFRV 113
            +  + ++      +G+A   ID     +  Q   V+ A P     + L   H  KG  +
Sbjct: 61  NAHGI-VMSADRSGLGDAPQLID-----KIRQVDGVRGATPFIYSEVMLSTPHGVKGLVL 114

Query: 114 LGTNHS-------YFEHYRYGSKQPLTLSQGRE--FNGLFETVIGADVAQALGYQVGSQI 164
            G +            +   GS   L    G +  ++G    +IG ++AQ LG  VGS++
Sbjct: 115 RGIDPQSAPSVLGILSNMTKGSVADLAPHTGADGAYSGPPGVIIGDELAQRLGVVVGSRV 174

Query: 165 II---AHGISDVGFSRHDNLPFTVVGILAPTGTPVDKTV-HVSLEAIEAIHVGWESGANL 220
            +   A   +  GF+     PF VVG+ +      D ++  VSL+A   + +G   GA  
Sbjct: 175 NLLSPAGQKTSAGFAPRIR-PFMVVGVFSTGMFEYDSSLGFVSLDAARDV-LGLPDGAVS 232

Query: 221 GHQPSAEQLAQRDFTPKQITAMLVGLKSKIQTFALQRQINDYPQEPLSAIMPGVALHELW 280
           G + +   + + D   +++T                R +  YP      +        L+
Sbjct: 233 GVELAVTDVYKADQVAERVT----------------RAVGGYPLYTRHWMEMNA---NLF 273

Query: 281 GMMSVAEQALMAVSVFVVVAGLLGMLSSLLTSLQERRREMSILRAMGARPQHVFALLVSE 340
             + + + A+  + V +V+ G   ++++L+  + E+ R+++IL +MGA    +  + + +
Sbjct: 274 AALKLEKTAMAVILVLIVLVGSFSIITTLVMLVMEKTRDIAILMSMGATRGMIRRIFMLQ 333

Query: 341 ASVL----TLVGILLGVSVLYLLLALAAPLIASQYGIQIALAGLTAYEWQLLGCVQLAGI 396
            +V+    T +G +LG+ V  LL       I   +G+          +W  +  +  + +
Sbjct: 334 GTVIGAIGTGLGYVLGLGVAELLKRY--QFIKLPHGVYSLDHLPVLLQWPDMLAIGASSM 391

Query: 397 VIGFIPALRAYRQSLS 412
           ++ F+  +   RQ+ S
Sbjct: 392 LLCFVATIYPARQAAS 407