Pairwise Alignments

Query, 419 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

 Score = 52.8 bits (125), Expect = 2e-11
 Identities = 55/231 (23%), Positives = 107/231 (46%), Gaps = 36/231 (15%)

Query: 183 FTVVGILAPTGTP-VDKTVHVSLEAIEAIHVGWESGANLGHQPSAEQLAQRDFTPKQITA 241
           + V+GIL  TG P  + +V +S +                     E+L + +    +   
Sbjct: 178 YKVIGILEETGNPRTENSVILSKDV-------------------GEELFEIN---NEYNM 215

Query: 242 MLVGLKSKIQTFALQRQINDYPQ-----EPLSAIMPGVALHELWGMMSVAEQALMAVSVF 296
           M+V ++S      +  +I D  +     E  S +        +  +  V    L+ V+  
Sbjct: 216 MIVSVRSGEDVNLVSEEIKDELEDSRGDENFSVLTAEQLAESINSIFEVLTIFLVGVAGI 275

Query: 297 VVVAGLLGMLSSLLTSLQERRREMSILRAMGARPQHVFALLVSEASVLTLVGILLGVSVL 356
            ++ G +G+ +++  S+ ERR+++ IL+A+GA    + ++ V EA  L L G ++G ++L
Sbjct: 276 SLLVGAVGISNTMHMSILERRKDIGILKALGAENTTILSIFVVEAGFLGLFGGIVG-TML 334

Query: 357 YLLLALAAPLIASQYGIQIALAGLTAYEWQLLGCVQ----LAGIVIGFIPA 403
            +L+A A   IA+  G  +  A ++   W+L+  V     + GI+ G+ PA
Sbjct: 335 GILIAKAIEYIAAISGYGLIRAWIS---WELIVGVLVFSFVVGILSGYFPA 382