Pairwise Alignments

Query, 419 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 424 a.a., ABC-type antimicrobial peptide transport system, permease component from Marinobacter adhaerens HP15

 Score =  400 bits (1029), Expect = e-116
 Identities = 199/410 (48%), Positives = 284/410 (69%), Gaps = 1/410 (0%)

Query: 2   KVILNLAWKSLLNRKATALLTVLTVAIAVVLLLGVERIRTQAKESFANTISGTDLIVGGR 61
           ++ L LA  SL +RK    L  LT+ ++V LLLG++ +RT+ K+SF +TI+GTDLI+G R
Sbjct: 4   RLALTLALASLWHRKRVLALVCLTLTLSVSLLLGIQYLRTEVKQSFTSTINGTDLIIGAR 63

Query: 62  SGQVNLLLYSVFRIGNATNNIDWKSYQEFSQHPAVKWAIPISLGDSHKGFRVLGTNHSYF 121
           SGQ+NLLLY+VF IG+ATNNI W +YQ   Q   + W IPISLGDS++G RV+ T+ ++F
Sbjct: 64  SGQLNLLLYTVFHIGDATNNIRWSTYQGLKQDNRLAWLIPISLGDSYRGNRVVATDENFF 123

Query: 122 EHYRYGSKQPLTLSQGREFNGLFETVIGADVAQALGYQVGSQIIIAHGISDVGFSRHDNL 181
           +H+RYG   PL L +G+ F G+F+ V+GA VA++L +QVG QI+++HG     FS H++ 
Sbjct: 124 KHFRYGRDLPLELDEGQWFEGVFDVVLGAGVARSLAHQVGEQIVLSHGGGRTSFSNHEDT 183

Query: 182 PFTVVGILAPTGTPVDKTVHVSLEAIEAIHVGWESGANL-GHQPSAEQLAQRDFTPKQIT 240
           PFTV GILAPTGTPVD+ V++SL+ +EA+HVGWESG  + G   + EQ   RDFTP  IT
Sbjct: 184 PFTVTGILAPTGTPVDQAVYISLDGMEAMHVGWESGVAIPGRTITPEQAKGRDFTPDAIT 243

Query: 241 AMLVGLKSKIQTFALQRQINDYPQEPLSAIMPGVALHELWGMMSVAEQALMAVSVFVVVA 300
           A+ VG+  +I TF +QR+IN +  EPLSAI+PGVAL ELW +M   E+AL+ ++ FVVV 
Sbjct: 244 AVFVGIDRQILTFRIQREINQFAGEPLSAILPGVALSELWRLMGQFERALLGITGFVVVT 303

Query: 301 GLLGMLSSLLTSLQERRREMSILRAMGARPQHVFALLVSEASVLTLVGILLGVSVLYLLL 360
            L+G+++ LLT   +R  E+++LRA GA P  + +L + E   L L   ++ +++    L
Sbjct: 304 SLIGLIAVLLTLQAQRAHEIAVLRATGASPALIASLYILECVALALAACVMALALGMAGL 363

Query: 361 ALAAPLIASQYGIQIALAGLTAYEWQLLGCVQLAGIVIGFIPALRAYRQS 410
           AL++P + + YG+QI L  LT  EW L+  V +A   +  IPA   +RQS
Sbjct: 364 ALSSPWLLANYGLQIELRPLTPEEWTLMALVPVAAFTVALIPAFNTWRQS 413