Pairwise Alignments

Query, 419 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 656 a.a., ABC transporter, ATP-binding/permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 60.1 bits (144), Expect = 2e-13
 Identities = 36/119 (30%), Positives = 63/119 (52%), Gaps = 5/119 (4%)

Query: 290 LMAVSVFVVVAGLLGMLSSLLTSLQERRREMSILRAMGARPQHVFALLVSEASVLTLVGI 349
           + A++V  +V G +G+++ +L S+ ER RE+ +  A+GAR   +    + EA ++ L G 
Sbjct: 533 ISAIAVISLVVGGIGVMNIMLVSVTERTREIGVRMAVGARQSDILRQFLIEAVLVCLCGG 592

Query: 350 LLGVSVLYLLLALAAPLIASQYGIQIALAGLTAYEWQLLGCVQLAGIVIGFIPALRAYR 408
            LGV++ YL+      ++ +Q G    +   T        C  L G++ GF+PA  A R
Sbjct: 593 ALGVALAYLI-----GVVFAQAGGSFQMIYSTTSIVAAFACSTLIGVLFGFLPARNAAR 646