Pairwise Alignments

Query, 238 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 235 a.a., ABC-type antimicrobial peptide transport system, ATPase component from Pseudomonas stutzeri RCH2

 Score =  237 bits (604), Expect = 2e-67
 Identities = 127/229 (55%), Positives = 159/229 (69%), Gaps = 4/229 (1%)

Query: 9   TSSVIELNDVVFCWPGASSPTLDIAHLQIARGEHLFVKGPSGCGKSTLLSLLTGINTATQ 68
           T+ ++ ++ + F WP   +  LDI   ++ RGE LF+KGPSG GK+TLL L+ G+  A +
Sbjct: 2   TAPLLAIDSLGFAWP-RQAELLDIPTFRLERGESLFLKGPSGSGKTTLLGLIGGVQKAGR 60

Query: 69  GVVSLLGSDLSRLSASQRDRFRADHIGYIFQQFNLLPYLSVLDNVTLPCHFSALRKQQV- 127
           G + LL  DL RLSA  RDRFR DH GYIFQQFNLLP+LSV +NV LPCHFS LR ++  
Sbjct: 61  GSIRLLDHDLGRLSAGARDRFRVDHTGYIFQQFNLLPFLSVRENVGLPCHFSRLRAERAR 120

Query: 128 --DGPLSHKAQSLLERLHLPSALLNKPVTELSIGQQQRVAAARALMGEPQLIIADEPTSA 185
              G     A SLLE L L   L  +    LSIGQQQRVAAARAL+G+P+L+IADEPTSA
Sbjct: 121 KRHGSTDAAAASLLEHLGLSPELFERRADALSIGQQQRVAAARALIGQPELVIADEPTSA 180

Query: 186 LDYDNREAFIALLREEAERVGSTLVFVSHDPTLEKLFERSVHLPTLNRA 234
           LD D+REAF+ LL  E    G++L+FVSHD +L  LF+RS+ L  LNRA
Sbjct: 181 LDADSREAFLHLLFSECRAAGASLLFVSHDQSLAPLFDRSLSLAELNRA 229