Pairwise Alignments

Query, 238 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 250 a.a., ABC transporter, ATP-binding protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  128 bits (321), Expect = 1e-34
 Identities = 82/205 (40%), Positives = 107/205 (52%), Gaps = 8/205 (3%)

Query: 24  GASSPTLDIAHLQIARGEHLFVKGPSGCGKSTLLSLLTGINTATQGVVSLLGSDLSRLSA 83
           G     LD   L I  GE + + GPSG GKSTLL+L+ G +    G + LLG      SA
Sbjct: 18  GERHRVLDNLTLDIHPGETVALTGPSGSGKSTLLNLIAGFDQPDDGHIRLLGRPSKHFSA 77

Query: 84  SQRDRFRADHIGYIFQQFNLLPYLSVLDNVTLPCHFSALRKQQVDGPLSHKAQSLLERLH 143
           S  DRFR   +G +FQQFNLL  L+V  N+  P   +         P      +L  RL 
Sbjct: 78  SDWDRFRRSELGMVFQQFNLLEPLNVQANIHFPLALNG-------KPWDDWCHTLTSRLG 130

Query: 144 LPSALLNKPVTELSIGQQQRVAAARALMGEPQLIIADEPTSALDYDNREAFIALLREEAE 203
           L + LL++PV  LS GQQQRVA ARAL   P L++ADEPT  LD  + +  +ALL   A 
Sbjct: 131 L-TELLSRPVDSLSGGQQQRVAIARALSQRPPLLLADEPTGNLDEHSGDEVMALLTSLAR 189

Query: 204 RVGSTLVFVSHDPTLEKLFERSVHL 228
              + ++ V+H        +R  HL
Sbjct: 190 ESNTAILMVTHSERCAAFMQRRWHL 214