Pairwise Alignments

Query, 238 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 227 a.a., ABC transporter-related protein (RefSeq) from Shewanella loihica PV-4

 Score =  130 bits (328), Expect = 2e-35
 Identities = 76/195 (38%), Positives = 120/195 (61%), Gaps = 8/195 (4%)

Query: 22  WPGASSPTLDIAHLQIARGEHLFVKGPSGCGKSTLLSLLTGINTATQGVVSLLGSDLSRL 81
           +P A+  +LD   L IA+GE + + GPSG GK+TLL+++ GI++ + G V + G D++ L
Sbjct: 18  FPVAAVKSLD---LTIAQGEFVAIMGPSGSGKTTLLNMIGGIDSPSSGAVFIDGEDITHL 74

Query: 82  SASQRDRFRADHIGYIFQQFNLLPYLSVLDNVTLPCHFSALRKQQVDGPLSHKAQSLLER 141
           S      FR DH+G+IFQ ++LLP L+ L+NV     F    +   +     +A +LL +
Sbjct: 75  SEQALIAFRRDHVGFIFQDYSLLPVLTALENV----EFVMQLQGHSEAECRDRAMALLAQ 130

Query: 142 LHLPSALLNKPVTELSIGQQQRVAAARALMGEPQLIIADEPTSALDYDNREAFIALLREE 201
           + L +A  +K   +LS GQQQRVA ARAL   P+ ++ADEPT+ LD  +    + +++  
Sbjct: 131 VGL-AAQQDKIPAKLSGGQQQRVAVARALAPRPRFVMADEPTANLDAKSTAELLDIMQSL 189

Query: 202 AERVGSTLVFVSHDP 216
            E+ G+T +F +HDP
Sbjct: 190 NEQEGTTFIFSTHDP 204