Pairwise Alignments

Query, 238 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 240 a.a., ABC transporter-related protein (RefSeq) from Shewanella loihica PV-4

 Score =  123 bits (309), Expect = 3e-33
 Identities = 71/195 (36%), Positives = 117/195 (60%), Gaps = 6/195 (3%)

Query: 34  HLQIARGEHLFVKGPSGCGKSTLLSLLTGINTATQGVVSLLGSDLSRLSASQRDRFRADH 93
           +L++  GE + V GPSG GK+T L++   +   T G   L   ++S LS ++    R + 
Sbjct: 25  NLEVKEGEFVAVTGPSGSGKTTFLNIAGLLEGFTNGEYHLDDVNISNLSDNKAAAIRNEK 84

Query: 94  IGYIFQQFNLLPYLSVLDNVTLPCHFSALRKQQVDGPLSHKAQSLLERLHLPSALLNKPV 153
           IG+IFQ FNL+P L++ +NV +P  +     ++       + ++ LE++ L + + + P 
Sbjct: 85  IGFIFQGFNLIPDLNLAENVEVPLRYRGFNAKE----RQRRVKAALEQVGLGARMKHLP- 139

Query: 154 TELSIGQQQRVAAARALMGEPQLIIADEPTSALDYDNREAFIALLREEAERVGSTLVFVS 213
           ++LS GQQQRVA ARAL GEP+ ++ADEPT  LD       + LL EE  + G+T++ V+
Sbjct: 140 SQLSGGQQQRVAIARALAGEPRFLLADEPTGNLDSLMARQVMELL-EEINKAGTTIIMVT 198

Query: 214 HDPTLEKLFERSVHL 228
           HDP L +  +R++ +
Sbjct: 199 HDPELARRAQRNIQI 213