Pairwise Alignments

Query, 238 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 246 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  124 bits (312), Expect = 1e-33
 Identities = 71/195 (36%), Positives = 118/195 (60%), Gaps = 6/195 (3%)

Query: 34  HLQIARGEHLFVKGPSGCGKSTLLSLLTGINTATQGVVSLLGSDLSRLSASQRDRFRADH 93
           +L+++ GE + V GPSG GK+T L++   +   T G   L G ++S LS ++    R + 
Sbjct: 25  NLEVSEGEFVAVTGPSGSGKTTFLNIAGLLEGFTHGDYFLDGINVSNLSDNKSAAVRNEK 84

Query: 94  IGYIFQQFNLLPYLSVLDNVTLPCHFSALRKQQVDGPLSHKAQSLLERLHLPSALLNKPV 153
           IG+IFQ FNL+P L++ +N+ +P  +     ++     + + +  LE++ L + + + P 
Sbjct: 85  IGFIFQGFNLIPDLNLAENIEVPLRYRGFSAKE----RNRRVEQALEQVGLAARMKHLP- 139

Query: 154 TELSIGQQQRVAAARALMGEPQLIIADEPTSALDYDNREAFIALLREEAERVGSTLVFVS 213
           T+LS GQQQRVA ARAL GEP+ ++ADEPT  LD       + LL E   + G+T++ V+
Sbjct: 140 TQLSGGQQQRVAIARALAGEPRFLLADEPTGNLDSLMARQVMELL-ENINQAGTTIIMVT 198

Query: 214 HDPTLEKLFERSVHL 228
           HDP L +  +R++ +
Sbjct: 199 HDPELARRAQRNIQI 213