Pairwise Alignments

Query, 238 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 230 a.a., lipoprotein releasing system ATP-binding protein LolD (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  129 bits (324), Expect = 5e-35
 Identities = 75/201 (37%), Positives = 119/201 (59%), Gaps = 5/201 (2%)

Query: 26  SSPTLDIAHLQIARGEHLFVKGPSGCGKSTLLSLLTGINTATQGVVSLLGSDLSRLSASQ 85
           ++  L    LQ+ +GE L + G SG GKSTLL ++  ++  + G V L G DL ++S+++
Sbjct: 21  TTQVLSDVDLQVFKGEQLAIVGTSGSGKSTLLHIMGTLDKPSSGKVLLAGEDLYQVSSAR 80

Query: 86  RDRFRADHIGYIFQQFNLLPYLSVLDNVTLPCHFSALRKQQVDGPLSHKAQSLLERLHLP 145
           + + R   +G+I+Q  +LLP  + L+NV +P       +          A+ LLER+ L 
Sbjct: 81  QAQIRNQDLGFIYQFHHLLPEFTALENVAMPAFIQGRDRTLAQAD----AKVLLERVGLG 136

Query: 146 SALLNKPVTELSIGQQQRVAAARALMGEPQLIIADEPTSALDYDNREAFIALLREEAERV 205
             + + P  ELS G++QRVA ARAL+ +P+L++ADEPT  LD  + EA   L+RE A ++
Sbjct: 137 HRMSHIPA-ELSGGERQRVAIARALINKPKLVLADEPTGNLDAKSGEAVYELIRELANQL 195

Query: 206 GSTLVFVSHDPTLEKLFERSV 226
           G+  V V+HDP L    +R +
Sbjct: 196 GTAFVVVTHDPKLAARMDRQL 216