Pairwise Alignments

Query, 238 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 656 a.a., ABC transporter, ATP-binding/permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  124 bits (312), Expect = 4e-33
 Identities = 74/195 (37%), Positives = 119/195 (61%), Gaps = 6/195 (3%)

Query: 34  HLQIARGEHLFVKGPSGCGKSTLLSLLTGINTATQGVVSLLGSDLSRLSASQRDRFRADH 93
           +L IARGE + + G SG GKSTL+++L  ++  ++G   + G D S++   +  + R +H
Sbjct: 29  NLSIARGEMVAIVGASGSGKSTLMNILGCLDKPSKGAYFIDGQDTSQMDVDELAKLRREH 88

Query: 94  IGYIFQQFNLLPYLSVLDNVTLPCHFSALRKQQVDGPLSHKAQSLLERLHLPSALLNKPV 153
            G+IFQ+++LL  L+ + NV +P  ++   + +       +A+SLL RL L   L +KP 
Sbjct: 89  FGFIFQRYHLLGDLNAVGNVEVPAVYAGKDRLE----RRDRAESLLSRLGLGERLDHKP- 143

Query: 154 TELSIGQQQRVAAARALMGEPQLIIADEPTSALDYDNREAFIALLREEAERVGSTLVFVS 213
            +LS GQQQRV+ ARALM    +I+ADEPT ALD  + E  + LL +E  R G T++ V+
Sbjct: 144 NQLSGGQQQRVSVARALMNGGDVILADEPTGALDSHSGEEMMRLL-QELHREGHTIIIVT 202

Query: 214 HDPTLEKLFERSVHL 228
           HD  + +  +R + +
Sbjct: 203 HDMHVAQHADRIIEI 217