Pairwise Alignments

Query, 238 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 300 a.a., ABC transporter from Bifidobacterium breve UCC2003

 Score =  125 bits (315), Expect = 7e-34
 Identities = 78/206 (37%), Positives = 115/206 (55%), Gaps = 8/206 (3%)

Query: 23  PGASSPTLDIAHLQIARGEHLFVKGPSGCGKSTLLSLLTGINTATQGVVSLLGSDLSRLS 82
           P  +   L+   L I       + GPSG GK++LL +L+G++    G V++ G+D+  L+
Sbjct: 29  PANTQTVLNNVSLDIDGAGLTAIVGPSGAGKTSLLYVLSGLDRPDSGRVTIGGTDVYALN 88

Query: 83  ASQRDRFRADHIGYIFQQFNLLPYLSVLDNVTLPCHFSALRKQQVDGPLSHKAQSLLERL 142
             +R RF   HIG++FQQ+NL+PYL+V +NV LP   +  +   V      +   LL R 
Sbjct: 89  EERRSRFIRGHIGFVFQQYNLVPYLTVEENVMLPLSLAHRKADYV------QVTQLLSRF 142

Query: 143 HLPSALLNKPVTELSIGQQQRVAAARALMGEPQLIIADEPTSALDYDNREAFIALLREEA 202
            L        V+ LS G+QQRVA  RAL+  P ++ ADEPT ALD  N E  + +LRE A
Sbjct: 143 GLRQR-AKTTVSALSGGEQQRVALCRALLMRPAVVFADEPTGALDTANSELVLQVLRELA 201

Query: 203 ERVGSTLVFVSHDPTLEKLFERSVHL 228
           +  GS++V V+HD     L +  + L
Sbjct: 202 D-AGSSVVMVTHDTDAAALADHVIFL 226