Pairwise Alignments

Query, 238 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 253 a.a., lipoprotein releasing system, ATP-binding protein (RefSeq) from Shewanella sp. ANA-3

 Score =  132 bits (333), Expect = 5e-36
 Identities = 77/201 (38%), Positives = 120/201 (59%), Gaps = 5/201 (2%)

Query: 26  SSPTLDIAHLQIARGEHLFVKGPSGCGKSTLLSLLTGINTATQGVVSLLGSDLSRLSASQ 85
           ++  L    LQ+ +GE L + G SG GKSTLL ++  ++  + G V L G DL ++S+++
Sbjct: 43  TTQVLSEVDLQVFKGEQLAIVGTSGSGKSTLLHIMGTLDKPSAGKVLLAGEDLYQVSSAR 102

Query: 86  RDRFRADHIGYIFQQFNLLPYLSVLDNVTLPCHFSALRKQQVDGPLSHKAQSLLERLHLP 145
           + + R   +G+I+Q  +LLP  S L+NV +P       + Q        A+ LLER+ L 
Sbjct: 103 QAQIRNQDLGFIYQFHHLLPEFSALENVAMPAFIQGRDRAQAQAD----AKVLLERVGLG 158

Query: 146 SALLNKPVTELSIGQQQRVAAARALMGEPQLIIADEPTSALDYDNREAFIALLREEAERV 205
             + + P  ELS G++QRVA ARAL+ +P+L++ADEPT  LD  + EA   L+RE A ++
Sbjct: 159 HRMSHIPA-ELSGGERQRVAIARALINKPKLVLADEPTGNLDAKSGEAVYELIRELANQL 217

Query: 206 GSTLVFVSHDPTLEKLFERSV 226
           G+  V V+HDP L    +R +
Sbjct: 218 GTAFVVVTHDPKLAARMDRQL 238