Pairwise Alignments

Query, 1254 a.a., DUF490 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1299 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  427 bits (1099), Expect = e-123
 Identities = 351/1294 (27%), Positives = 595/1294 (45%), Gaps = 65/1294 (5%)

Query: 1    MIKRALKWTKWLSMSLLVLVILLVLALAGALFTNPGLHVVLWGAQQALPQLKVEQAQGAL 60
            ++ R L W + L   LL L + L++ LA  + T  G  + +  A   +P L +    G L
Sbjct: 31   LLYRLLCWLRNLVRVLLYLPLALLILLAILIGTPFGSRIAVNLADLLVPDLSLSYGGGTL 90

Query: 61   FPRFTLQGVNYADSELNLSFSVQKLSLAINPNCLLEPSICINELALSGVKLDL------- 113
              +  L+   +  + + +    + LSL   P CLL+  +C++ L    V++D+       
Sbjct: 91   NGQLQLEHAKWQMTGIEVE--TEGLSLNWRPLCLLQRQVCVDSLGADAVRVDIDTDLLTA 148

Query: 114  --PSLAESEPAPDEPDSEPLGDISTPIPIRLGQLALQDIELNILGNRVAWQQLTTRASWQ 171
              P  A  E A  +  SE  G ++ PI I L Q  L  I + +   +   +QL  +ASW 
Sbjct: 149  SSPDAALKEKAAIDETSEH-GPLTLPIGIILNQSDLNQIRVRVNEMQFNAEQLAAKASWL 207

Query: 172  GNRLRIGQTEWQG--IRLALAESEASTEPEAAQAATSDSAE--PL-QLPDVMIPLHIELA 226
               LR+ + +  G  + + L +SE  T+P  A+    D+    PL QLP+V IP+ I + 
Sbjct: 208  ETGLRVNRLDSSGLLVSIPLGQSEDGTQPIQAKNDRQDAQASWPLSQLPEVEIPMPIFVD 267

Query: 227  RFDIRDFRLEQETPII-VNHLALQATAAQHDVSISSLELSMPELDAQLNAQATLSQDYPI 285
               + D  L     I     + L  +   + +++ SL  S     A+L+ + +L+QDYP+
Sbjct: 268  GAHLVDSELRLGERIDKFAAIDLAGSYLGYKITVDSLAFSHDYGKARLDGEMSLTQDYPM 327

Query: 286  QLELRSQVH------LADFKGQTLSLAAQGSLADLTVQANLDSLAQAQLNSHFNLLDADI 339
             L L ++ +      L + K Q L+    G  + L V+   +   +  L++  NL    +
Sbjct: 328  ALHLEAEFNANKISELPELKNQRLNAEINGGFSALAVKLKGEGHLELDLDAKGNLSTPAM 387

Query: 340  PFDLQLSQVKAQWPMLGEGDYHVEVPELSIQGSLAKYQFALQGALQGKDLPNVSLALQGH 399
            P+++ LS     WP L +  Y  +   L   GSLA     L G L+    P +SL  Q  
Sbjct: 388  PYEMTLSSRHLMWP-LAQAQYEAKALTLESSGSLASQSLKLTGELKTPYHPWLSLNTQLT 446

Query: 400  GNLDEVALQSLKVDTLGGLVTGNAVANWKNPLNWAAR-----LNLKNIQPGLQWPEAEGK 454
                 V + +L VD+  G +       +   ++W        L+L  +      P  E +
Sbjct: 447  HQDQNVEVAALSVDSEMGKLDLKGKLGYGEAISWQLEADTQDLDLAQLDVMPDKPLPETQ 506

Query: 455  ISGELDTSGALTEQGGWQVEVSRLAIKGVLRDYPLKMLGELSASDVQGQGDITLQTKGVS 514
            ISG L + G  +++  W V +S+  ++G +  YPL++ G++S +D        L  + + 
Sbjct: 507  ISGSLHSQGRFSDKQ-WSVGISQADLQGQVDQYPLRLQGDISLND-----KFQLNAEHLQ 560

Query: 515  LVHGPNSLTAKGQLSKQWRMSVELDVPDLSKSLPDAKGKVIGDVLLRGDLKQPRVKLVLD 574
            L    + LT  G++   W +  +L VP LS   P A G +   + + GD + P V +  D
Sbjct: 561  LDALESQLTLSGRVDDAWALDGQLSVPALSLWDPSASGAIKAVINVSGDDEHPEVAINAD 620

Query: 575  ADSLQWQELGSIGHVTLQGNLVPLPEPQGELTLQVRAIQYQDQRIDTVDLKAQGSQRKHE 634
                ++ ++ ++    L     P    Q  L+L+   I+ Q   +  + L  +G   K +
Sbjct: 621  TIEFKYADI-TVDKAKLIAFYRPQDAHQFALSLKSSGIKGQGMALSDLTLGFKGDIAKQK 679

Query: 635  VTLDVTSDLA-STSLAMNGRLRTEPTLRWQGELERMWLNSPQGQWLLQQATALSFDQRTE 693
            + L    DL  +TS+A       E T R+  +++R+ LNS  G   L +   L +D +  
Sbjct: 680  LGLQTYGDLQLNTSIASTF---DEKTQRFDAKIKRISLNSRLGAMALDEPFDLYWDNKHA 736

Query: 694  RVTVAAHCWVQGEASLCLEEEAELGARGETRLAIKQFDFKQLAGVLPKETKLSGGLNGQV 753
            +  ++  CW    ASLCL + AELG +G+TRL         LA VLP+  K  G      
Sbjct: 737  KGEISPFCWRHDAASLCLTDTAELGDKGDTRLQFAGDLGALLAPVLPENLKWRGPTQLDG 796

Query: 754  WAKWAPKAAPQLQANLELTQGQVTQKLNKS-VTFGWDKAQFSAQLAKNQLQASWLLDATD 812
              +WA  A P  Q  L +  GQ      K  +   +     +A+L + QL     L++  
Sbjct: 797  ELQWAKGAKPTGQLTLAMAPGQFDLTTTKRHIEAQYHYLNLTARLDELQLAIDTQLESER 856

Query: 813  NGDLSGNIQIADVRAEQKTMLGSLNLTTFNLDFLQPLIGELSEAKSNINADVQFHGPMLH 872
               +   + I+     +  + G ++L   +L  L     +L      +++ +   G +  
Sbjct: 857  FAKIDSQLTIST--DPEHRLSGKIDLKDIDLHALADFTPQLEVLDGKVSSAIILGGTLNE 914

Query: 873  PQLNGEIAINDIRVKGEISPVDVQSGQVSLKFNGYQAVLNADIQTTDGLLEVDGDADWQQ 932
            P L+G + +ND ++    +P  + + ++ L   G    +       DG  +VDG   WQ 
Sbjct: 915  PDLSGTVDLNDGQLAAAANPTLLDNIKLKLTLLGQTGQVKGQWTMGDGKAKVDGVIGWQ- 973

Query: 933  IEDWRLKARVHAPSMMVELPPMVRVKVIPDLTLTMQPQLARVTGNIALPWGRIVVEELPP 992
             E  +         + +  PP+  + V PDL ++   +   + G + +P G I + +LP 
Sbjct: 974  -EGLKGDLNFSGDKLAIIQPPLAILDVSPDLDISFSDKHLDIRGKLDVPSGHIKIVQLPE 1032

Query: 993  SAIGVSKDQILLNADFEPLTDKERIPFSVESDVNVQIGDDFQLSAFGLQGNLVGRLNVAQ 1052
              +  S D +  ++       K+  P +V S + V++GD   +   GL+G LVG L + Q
Sbjct: 1033 GGVAESSDVVFNDSLASQAQVKD--PIAVTSQIAVKVGDKLTIDGMGLRGMLVGTLELRQ 1090

Query: 1053 KD-KGPFILGEVNIRNGQYRSFGQDLQIKEGKILMNGPVDQPYLAITAIRNPNNTQDGVV 1111
               K P + G++ + NG Y+  GQ L IK G++   GP+  P L I AIR   +  + VV
Sbjct: 1091 AAFKPPLLYGDIKVVNGNYKFMGQTLSIKAGEVQFIGPMAVPNLNIEAIREIKD--EDVV 1148

Query: 1112 AGVRVSGPSDEPSLTIFSEPAMPQANALSYLLRGQNIDGEAG--------GNAMT--TTL 1161
            AGVR++G   +P +T+FS PA  QA  LSY+++G  ++  +         G A+T    L
Sbjct: 1149 AGVRITGTPLKPVVTLFSNPAKEQAEILSYIIKGTGLNNSSSDQNNALMMGAALTLGNQL 1208

Query: 1162 IGLSLAQSGKLVGEIGQAFGVQDLQLDTAGSGDDSQVTVSGYILPGLQVKYGVGIFNSVG 1221
               + +  G     I + FG+ ++Q D   + D+ +V +SG+I   L VKYGVG+FN   
Sbjct: 1209 GDNAFSNLGSSASGIIEKFGISNVQFD---ANDEGKVAISGFIGEDLMVKYGVGVFNPGY 1265

Query: 1222 EFTVRYRLMQDLYLEAVSG-VDSAVDLLYQFEFN 1254
            E TVRY LM  LYLE+VSG +   +D+ Y F+ +
Sbjct: 1266 EMTVRYYLMSQLYLESVSGTISKTLDIYYNFDID 1299