Pairwise Alignments

Query, 1254 a.a., DUF490 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1385 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  403 bits (1035), Expect = e-116
 Identities = 330/1357 (24%), Positives = 596/1357 (43%), Gaps = 149/1357 (10%)

Query: 11   WLSMSLLVLVILLVLALAGALFTNPGLHVVLWGAQQALPQLKVEQAQGALFPRFTLQGVN 70
            ++ +SLLVL+ LL       L T  G  + +  A + +P L +    G L    TL  V+
Sbjct: 59   YVPLSLLVLMALL-------LGTEIGSRISVELADKFVPDLALTYTSGTLNKDLTLAHVS 111

Query: 71   YADSELNLSFSVQKLSLAINPNCLLEPSICINELALSGVKLDLPSLA--------ESEPA 122
            +  S   +   ++ L LA  P CLL+  +C+N L  S V + + + A        ++E  
Sbjct: 112  W--SMAGIQVELEDLHLAWQPTCLLQKQLCVNALNASKVDVSIETDALSTDNNTNDTEVV 169

Query: 123  PDEPDSEPLGDISTPIPIRLGQLALQDIELNILGNRVAWQQLTTRASWQGNRLRIGQTEW 182
             D+ D EP  ++  P  I L    L  I + +   R +   +TT A+W    L + Q   
Sbjct: 170  SDDTD-EPT-ELVLPFGITLDVADLNHINVRVDNMRFSANHITTSATWFAKGLTVEQLSS 227

Query: 183  QGIRLAL----------------AESEASTEPEAAQAATSD------------------- 207
            +G+ + +                 +  A+TE E  + AT                     
Sbjct: 228  EGLAILIPTGDETTTAITGPTQVTQKTATTESETVKPATEAVKENTTNATDKPAEDKSLA 287

Query: 208  SAEPL-----------------------QLPDVMIPLHIELARFDIRDFRLE-QETPIIV 243
            SA+P                         LP V +P  + +    + +  L+      + 
Sbjct: 288  SAKPAPSTPSQSNTSAPTDKLADEWALAHLPQVFMPFPVNVKSLTLDNSNLQIGAREDVF 347

Query: 244  NHLALQATAAQHDVSISSLELSMPELDAQLNAQATLSQDYPIQLELRSQV----HLADFK 299
            +H+ LQ    Q+ +++  L L+    +  +  +  L QDYP+ L++ + +     L +  
Sbjct: 348  SHIELQGQFEQYQLTLDKLILTHSYGELSVMGKLALEQDYPLALDIEANLTQVAELPELI 407

Query: 300  GQTLSLAAQGSLADLTVQANLDSLAQAQLNSHFNLLDADIPFDLQLSQVKAQWPMLGEGD 359
             Q L L    S+  L++ A     A   L     L D  + +   L + + QWP L   +
Sbjct: 408  HQQLKLKLTDSVGQLSLHALAQGDADFSLEGQITLKDPALTYKATLEKARLQWP-LNNPE 466

Query: 360  YHVEVPELSIQGSLAKYQFALQGALQGKDLPNVSLALQGHGNLDEVALQSLKVDTLGGLV 419
            Y V    L+ QGSL K    +   +       +++  + H    +++++        G V
Sbjct: 467  YIVSDLTLNSQGSLNKQAATIDANVISPFHKILAIRSELHHQDTKLSIKQFSAKGELGAV 526

Query: 420  TGNAVANWKNPLNWAARLNLKNIQ------------------------------PGLQWP 449
                  ++ N + W A++ L  ++                              P    P
Sbjct: 527  DVEGELDYANAMTWKAKVLLDKLKLQEITLPETAQTKEPAPSKDTKTPQNNAAAPATSLP 586

Query: 450  EAEGKISGELDTSGALTEQGGWQVEVSRLAIKGVLRDYPLKMLGELSASDVQGQGDITLQ 509
             +   ISG+L TSG L +   WQV ++   + G ++ YP  +  ++S +D      + + 
Sbjct: 587  NS--LISGQLQTSGRL-QDNAWQVSLTETQLSGTMQGYPFDITADVSIND-----KLYVS 638

Query: 510  TKGVSLVHGPNSLTAKGQLSKQWRMSVELDVPDLSKSLPDAKGKVIGDVLLRGDLKQPRV 569
             KGV+     ++LT  G+ +K W ++ +L VPD    LP A G++  D+ + GD K P++
Sbjct: 639  AKGVNAQVLGSTLTLAGETNKNWNLAGKLLVPDFGLWLPQASGQLQADINVTGDEKHPQL 698

Query: 570  KLVLDADSLQWQELGSIGHVTLQGNLVPLPEPQGELTLQVRAIQYQDQRIDTVDLKAQGS 629
            +L      L    +  +   TL+    PL   +  ++L+ +A+Q   + +DTV   ++G 
Sbjct: 699  ELTAQLVDLAHHNI-KLRESTLKAYYKPLDLHEFAISLKSKALQLGSKSLDTVTFGSKGD 757

Query: 630  QRKHEVTLDVTSDLASTSLAMNGRLRTEPTLRWQGELERMWLNSPQGQWLLQQATALSFD 689
             +  ++TL  T DL    L +  +   + + +   ++ ++ L +P G+W + +   +++D
Sbjct: 758  IQNQKLTLSATGDLG-LELGVTSQYDMKKS-QLLAQVNKINLATPVGRWEIDKDILIAWD 815

Query: 690  QRTERVTVAAHCWVQGEASLCLEEEAELGARGETRLAIKQFDFKQLAGVLPKETKLSGGL 749
            +   +  ++  C V   + +CL+ +  LG +G+ +L+      K L  VLP      G  
Sbjct: 816  KNNTKGNISPFCLVNPNSKICLDNQVSLGKKGDAQLSYTGNLGKLLVPVLPSNMSWDGSS 875

Query: 750  NGQVWAKWAPKAAPQLQANLELTQGQVTQKL--NKSVTFGWDKAQFSAQLAKNQLQASWL 807
            +      WA    P    +     G +  K   N+ VT  + +    A L   +L +S  
Sbjct: 876  SLLANFAWAAGRKPTANVDFNFAPGSIKLKRAKNREVTIKYQQLALKANLDGKRLLSSIS 935

Query: 808  LDATDNGDLSGNIQIADVRAEQKTMLGSLNLTTFNLDFLQPLIGELSEAKSNINADVQFH 867
             D+ D       I +       +T+ G  N+   NL  L     +L+  +  + + + F 
Sbjct: 936  FDSEDVASWQSEITVNVT--PDRTLSGYANIKQINLQPLGEFFPQLNTLEGLLTSKLNFA 993

Query: 868  GPMLHPQLNGEIAINDIRVKGEISPVDVQSGQVSLKFNGYQAVLNADIQTTDGLLEVDGD 927
            G +  P+++G +++    +    +P  +    +S+   G QA L       +GL  + G+
Sbjct: 994  GTLDAPEVSGNVSLTQGALALTANPTLINKIDMSMDLGGQQASLKGRWMMGNGLGRIIGE 1053

Query: 928  ADWQQIEDWRLKARVHAPSMMVELPPMVRVKVIPDLTLTMQPQLARVTGNIALPWGRIVV 987
              W Q + +  +  V    + V  PP+  + + PDLT+    +   V G + +P G I +
Sbjct: 1054 MRWPQGQ-FSGELAVKGDKLAVIQPPLALLDISPDLTIAFSSRQLEVKGVVDVPSGSIKI 1112

Query: 988  EELPPSAIGVSKDQILLNADFEPLTDKERIPFSVESDVNVQIGDDFQLSAFGLQGNLVGR 1047
             +L    + +S+D +    D    T  +  P+++ +D+N+ +G+D ++   GL+G L G 
Sbjct: 1113 VQLAEGGVALSEDVVF--DDSIAATQPKASPYAIVADLNINVGNDLKVDGMGLKGKLQGT 1170

Query: 1048 LNVAQKD-KGPFILGEVNIRNGQYRSFGQDLQIKEGKILMNGPVDQPYLAITAIRNPNNT 1106
            L + Q+  + P + G++ ++ G Y+  GQ L+I+ G++   GP+  P L I AIR   + 
Sbjct: 1171 LKLQQQAFRPPLLFGDIKVKQGSYKFMGQTLKIRAGEVQFVGPISVPNLNIEAIREIKS- 1229

Query: 1107 QDGVVAGVRVSGPSDEPSLTIFSEPAMPQANALSYLLRGQNIDG---EAGGNAMTTTLIG 1163
             + ++AGVRV+G    P +T+FS PA  QA  LSY+++G   +    E   + M    +G
Sbjct: 1230 -EDLIAGVRVTGTPARPVVTLFSNPAKEQAEILSYIIKGSGFNSSNNEQNNSLMMGAALG 1288

Query: 1164 LSL-AQSGKLVGEIG-------QAFGVQDLQLDTAGSGDDSQVTVSGYILPGLQVKYGVG 1215
            LS     G  +  IG       + FG  ++QLDT    D+ +V +SG+I   L VKYGVG
Sbjct: 1289 LSSQVGGGGAINNIGNTATGIIEEFGFSNVQLDT---NDEGRVAISGFIGDKLMVKYGVG 1345

Query: 1216 IFNSVGEFTVRYRLMQDLYLEAVSG-VDSAVDLLYQF 1251
            +FN   E TVRY L+  LYLE VSG +  ++D+ Y F
Sbjct: 1346 VFNPGYEMTVRYYLLSQLYLETVSGTLGQSLDIYYNF 1382