Pairwise Alignments

Query, 451 a.a., UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 485 a.a., UDP-N-acetylmuramate--alanine ligase from Pseudomonas stutzeri RCH2

 Score =  152 bits (384), Expect = 2e-41
 Identities = 109/365 (29%), Positives = 183/365 (50%), Gaps = 18/365 (4%)

Query: 3   IHILGICGTFMGGVAMLARQLGHKVTGSDANVYPPMSTMLEAQGIEIIEGFDPVQLEPKP 62
           IH +GI G  M G+A +   LG++V+GSD       +  L++ G +I  G     +    
Sbjct: 21  IHFVGIGGVGMCGIAEVLLNLGYEVSGSDLKE-SASTDRLQSFGAQIFIGHQAGNVAGA- 78

Query: 63  DLVVIGNAMSRGNPCVEYVLNHNLRYTSGPQWLQDFLLHDRWVIAVSGTHGKTTTSSMIA 122
           D++V+ +A++  NP V   L   +      + L + L+  R  IAV+GTHGKTTT+S++A
Sbjct: 79  DVLVVSSAVNSANPEVALALEQRIPVVPRAEMLAE-LMRYRHGIAVAGTHGKTTTTSLLA 137

Query: 123 WVLEHCGYQPGFLVGGVLGNFGISARLGESMFFVVEADEYDSAFFDKRSKFVHYHPRTLV 182
            V    G  P F++GG L   G +A+LG S + + EADE D++       F+H  P   V
Sbjct: 138 SVFAAGGLDPTFVIGGRLTAAGTNAQLGSSRYLIAEADESDAS-------FLHLQPMVAV 190

Query: 183 MNNLEFDHADIF-DNLEAIKRQFHHLVRTVPGNGRILAPKQDEALADVL-QRGCWSETEF 240
           + N++ DH   +  +   +K+ F   +  +P  G  +    D  + +++ Q G  + T  
Sbjct: 191 VTNIDADHMSTYGGDFGKLKKTFVEFLHNLPFYGLAVLCVDDPVVREIIPQIGRPTTTYG 250

Query: 241 SGEQGEWQAEKITADG--SQFHVLLKGERVGQVNWSLVGDHNVSNALMAIAAARHVGVAP 298
             E  + +A  +  +G  + F VL  G     V+  + G+HNV NAL  IA A   G+  
Sbjct: 251 FSEDADVRAINVRQEGMRTYFTVLRDGCEPLDVSVHMPGNHNVLNALATIAIATDEGIDD 310

Query: 299 ELACEALGLFVNTKRRLELKGEI---NG-VTVYDDFAHHPTAIELTLGGLRNKVGDKKII 354
           E   + L  F    RR ++ G++   NG V + DD+ HHP  +   +  +R    +++++
Sbjct: 311 EAIIQGLAEFAGVGRRFQVYGDLPVENGSVMLVDDYGHHPREVAAVIKAVRGGWPERRLV 370

Query: 355 AVLEP 359
            V +P
Sbjct: 371 MVYQP 375