Pairwise Alignments

Query, 451 a.a., UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 478 a.a., UDP-N-acetylmuramate--L-alanine ligase from Synechococcus elongatus PCC 7942

 Score =  138 bits (348), Expect = 3e-37
 Identities = 126/471 (26%), Positives = 201/471 (42%), Gaps = 44/471 (9%)

Query: 4   HILGICGTFMGGVAMLARQLGHKVTGSDANVYPPMSTMLEAQGIEIIEGFDPVQLEPKPD 63
           H +GI G  M  +A +  +    V+GSD      ++  L   G +I +      LE   +
Sbjct: 13  HFIGIGGIGMSALAQVVTERQLPVSGSDIR-RSHITDRLAQLGAQIFDRQAATNLEFFQE 71

Query: 64  LVVIGNAMSRGNPCVEYVLNHNLRYTSGPQW---------LQDFLLHDRWVIAVSGTHGK 114
            V  G   S    C   +  HN  Y +             L   LL     IAV+GTHGK
Sbjct: 72  AVSAGQ--SPQVICSTAIHAHNEEYQAAIDLGCPVFHRSDLLAALLRVYESIAVAGTHGK 129

Query: 115 TTTSSMIAWVLEHCGYQPGFLVGGVLGNFGISARLGESMFFVVEADEYDSAFFDKRSKFV 174
           TTTS +IA++L   G  P  ++GG +   G +ARLG+    V EADE D +        V
Sbjct: 130 TTTSGLIAYLLYQAGLDPTVVIGGEVNALGGNARLGQGRHLVAEADESDGSL-------V 182

Query: 175 HYHPRTLVMNNLEFDHADIFDNLEAIKRQFHHLVRTVPGNGRILAPKQDEALADVLQRGC 234
                  ++ N+E DH D + +LEA+   F    +T   N   L    D         G 
Sbjct: 183 KLQAAIGIITNIELDHPDHYCDLEAVISTF----KTFSDNCSQLIANWDCPTVRDRLPGT 238

Query: 235 WSETEFSGEQGEWQAEKIT--ADGSQFHVLLKGERVGQVNWSLVGDHNVSNALMAIAAAR 292
            S +       ++  ++++    G+Q  +  +GE +G+++  L+  HN+SNAL AIAA R
Sbjct: 239 ISYSLDPARGADYTVDQVSFRGSGTQARIWERGELLGRIHLPLLEAHNLSNALAAIAACR 298

Query: 293 HVGVAPELACEALGLFVNTKRRLELKGEINGVTVYDDFAHHPTAIELTLGGLRNKVGD-- 350
           H+G+      E L  F   +RR E +G   G+   DD+AHHP+ +  TL   R ++    
Sbjct: 299 HLGMDFASIREGLAGFEGARRRFEFRGSAQGIQFVDDYAHHPSELAATLAAARLQIDSGC 358

Query: 351 -------KKIIAVLEPRSATMKLGVHKETLAASLHSADSVYL--------YQPSNIP-WS 394
                  K+++A+ +P   +       E  A S   AD V +          P  +   +
Sbjct: 359 SRLPEVPKRLVAIFQPHRYSRTQAFLAE-FAQSFGPADLVLISDIYAAGERNPGQLSGQT 417

Query: 395 VEEVAKQCQQPAQVSANMDEFVAMIAKEAQAGDQILVMSNGGFEGIHGKLL 445
           + +   Q Q     + +++     + +  Q GD  L +  G    +  +LL
Sbjct: 418 LADAIAQYQANVHYAPDLEAVEQRLHQLLQPGDLALFLGAGNLNQVIPRLL 468