Pairwise Alignments

Query, 451 a.a., UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 471 a.a., UDP-N-acetylmuramate--L-alanine ligase from Sinorhizobium meliloti 1021

 Score =  170 bits (431), Expect = 8e-47
 Identities = 136/459 (29%), Positives = 213/459 (46%), Gaps = 44/459 (9%)

Query: 3   IHILGICGTFMGGVAMLARQLGHKVTGSD----ANVYPPMSTMLEAQGIEIIEGFDPVQL 58
           +H +GI G  M G+A +   LGH+V GSD    ANV       L  +GI I  G     L
Sbjct: 10  VHFIGIGGIGMSGIAEVLHNLGHRVQGSDQADSANVQ-----RLREKGISISIGHKAENL 64

Query: 59  EPKPDLVVIGNAMSRGNPCVEYVLNHNLRYTSGPQWLQDFLLHDRWVIAVSGTHGKTTTS 118
               ++VV+  A+ + NP +       L      + L + L+  R  IA+ GTHGKTTT+
Sbjct: 65  GDA-EVVVVSTAIKKDNPELIAAREKFLPVVRRAEMLAE-LMRFRNAIAIGGTHGKTTTT 122

Query: 119 SMIAWVLEHCGYQPGFLVGGVLGNFGISARLGESMFFVVEADEYDSAFFDKRSKFVHYHP 178
           SM+A +L+  G  P  + GG++  +G +AR+G   + VVEADE D  F    +       
Sbjct: 123 SMVAALLDAGGLDPTVINGGIINAYGTNARMGAGEWMVVEADESDGTFLKLPADIA---- 178

Query: 179 RTLVMNNLEFDHADIFDNLEAIKRQFHHLVRTVPGNG-RILA---PKQDEALADVLQRGC 234
              V+ N++ +H D + + +A++  F   V  VP  G  +L    P+    +  +  R  
Sbjct: 179 ---VVTNIDPEHLDHYGSFDAVRAAFRQFVENVPFYGFGVLCLDHPEVQSMVGKIEDRKV 235

Query: 235 WSETEFSGEQGEWQAEKITADG--SQFHVLLKGERVGQV------NWSLVGDHNVSNALM 286
            +  E    Q + +   I  DG  S F + ++  R GQV         + G HNVSNA  
Sbjct: 236 VTYGE--NPQADVRFHNIRMDGATSIFDIEIRRRRTGQVIEIKDLRLPMPGRHNVSNATA 293

Query: 287 AIAAARHVGVAPELACEALGLFVNTKRRLELKGEINGVTVYDDFAHHPTAIELTLGGLRN 346
           A+A A+ +G+ PE     L  F   KRR  L GE NG  ++DD+ HHP  I   L   R 
Sbjct: 294 AVAVAQRLGIKPEDIARGLATFGGVKRRFTLTGEWNGARIFDDYGHHPVEIRAVLRAAR- 352

Query: 347 KVGDKKIIAVLEPRSATMKLGVHKETLAASLHSADSVYL----------YQPSNIPWSVE 396
           +    +I+AV +P   + +L    E   +  + AD++ L           +  +    V+
Sbjct: 353 EACQGRIVAVHQPHRYS-RLSSLFEDFTSCFNDADTILLAPVYAAGEEAIEGVSSEALVD 411

Query: 397 EVAKQCQQPAQVSANMDEFVAMIAKEAQAGDQILVMSNG 435
            +     + A+     +    +IAK AQ GD ++++  G
Sbjct: 412 RIKAAGHRDARHVPGQEALAPVIAKIAQPGDFVVLLGAG 450