Pairwise Alignments

Query, 451 a.a., UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 481 a.a., UDP-N-acetylmuramate--alanine ligase (NCBI) from Rhodospirillum rubrum S1H

 Score =  149 bits (376), Expect = 2e-40
 Identities = 130/456 (28%), Positives = 207/456 (45%), Gaps = 38/456 (8%)

Query: 3   IHILGICGTFMGGVAMLARQLGHKVTGSDANVYPPMSTMLEAQGIEIIEGFDPVQLEPKP 62
           +H +GI G  M G+A +   LG++V GSD +    +  + +  GI I  G     L    
Sbjct: 11  LHFVGIGGIGMSGIAEVLHNLGYRVQGSDLSDNANVKRLRDL-GIPIAIGHKAANLGDA- 68

Query: 63  DLVVIGNAMSRGNPCVEYVLNHNLRYTSGPQWLQDFLLHDRWVIAVSGTHGKTTTSSMIA 122
            +VVI +A+   NP V       L      + L + L+  +W IAV+GTHGKTTT+S++A
Sbjct: 69  QVVVISSAVKASNPEVMDARARFLPVVRRAEMLGE-LMRLKWSIAVAGTHGKTTTTSLVA 127

Query: 123 WVLEHCGYQPGFLVGGVLGNFGISARLGESMFFVVEADEYDSAFFDKRSKFVHYHPRTL- 181
            +L+  G  P  + GG+L   G +A LG   + VVEADE D  F           P T+ 
Sbjct: 128 QLLDAAGLDPTVINGGILNARGTNAYLGTGEWMVVEADESDGTFTKL--------PATIS 179

Query: 182 VMNNLEFDHADIFDNLEAIKRQFHHLVRTVPGNG----RILAPKQDEALADVLQRGCWSE 237
           ++ N++ +H D +   + ++  F   +  +P  G     I  P+    +  +  R     
Sbjct: 180 LVTNIDPEHLDFYGTFDKVREAFRAFIHNLPFYGFACMCIDHPEVQAMIPQLQDRKI--I 237

Query: 238 TEFSGEQGEWQAEKITAD--GSQFHVLLK-----GER-VGQVNWSLVGDHNVSNALMAIA 289
           T     Q + +   +T    G++F V+L      G R +  +   + G HNV NAL AI 
Sbjct: 238 TYGLSPQADIRGANVTLGPRGARFDVILTDRAGGGSRTIEGIRLPMYGRHNVLNALGAIG 297

Query: 290 AARHVGVAPELACEALGLFVNTKRRLELKGEINGVTVYDDFAHHPTAIELTLGGLRNKVG 349
            A  +G+   +  + L  F   KRR    G+  GVTV DD+ HHP  I   L   R+   
Sbjct: 298 IAAEMGIDDAVIRDGLYHFEGVKRRFTRTGDAGGVTVIDDYGHHPVEIAAVLKAARDAT- 356

Query: 350 DKKIIAVLEPRSATMKLGVHKETLAASLHSAD-----SVYLYQPSNIPWSVEEVAKQ--- 401
           ++++IAV++P   + +L    E      + AD      VY      IP + +E   +   
Sbjct: 357 EREVIAVVQPHRYS-RLNSLFEDFCTCFNDADQVVVADVYAAGEQPIPGASKEALAEGLK 415

Query: 402 --CQQPAQVSANMDEFVAMIAKEAQAGDQILVMSNG 435
               +   V  N      +IA+ A+ GD ++ +  G
Sbjct: 416 VHGHKSVHVLTNEQALPELIARIAKPGDLVVCLGAG 451