Pairwise Alignments

Query, 451 a.a., UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 486 a.a., UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 52.4 bits (124), Expect = 3e-11
 Identities = 78/281 (27%), Positives = 114/281 (40%), Gaps = 38/281 (13%)

Query: 105 VIAVSGTHGKTTTSSMIAWVLEHCGYQPGFLVGGVLGNFGIS---------------ARL 149
           V+ V+GT+GKTT    I ++LEH     G   G VLG                     +L
Sbjct: 104 VVGVTGTNGKTT----ITYLLEHLFASAGRRCG-VLGTVSYRWPGHVEAAPLTTPDCLQL 158

Query: 150 GESMFFVVEADEYDSAFFDKRSKFVHYHPRT------LVMNNLEFDHADIFDNLEAIKRQ 203
            E +  +  A   D AF +  S  +             V+ NL  DH D   ++E     
Sbjct: 159 HEMLGQMAGAG-VDVAFMEVSSHALDQERVAGIRFAGAVLTNLTQDHLDYHGDMETYFNA 217

Query: 204 FHHLVRTVPGNGRILAPKQDEA-----LADVLQRGCWSET--EFSGEQGEWQAEKITADG 256
              L R +P  G+  A   D+      LAD+     ++ T    SG +     E +    
Sbjct: 218 KARLFRELPEVGKHCAVNADDPWGRRLLADLPGAVGFALTGAPVSGTR-HLHGEMLRCST 276

Query: 257 SQFHVLLKGE-RVGQVNWSLVGDHNVSNALMAIAAARHVGVAPELACEALGLFVNTKRRL 315
           +  H+ +  E R  +V+  LVG HN SN L   A    +G++P      L  F     RL
Sbjct: 277 AGVHLRMHFEGRTWEVDSPLVGAHNASNLLAVQAVGLGLGLSPADFVH-LENFTGVPGRL 335

Query: 316 ELKGEINGVTVYDDFAHHPTAIELTLGGLRNKVGDKKIIAV 356
           E      G+ V+ D+AH P A+   L  LR+ VG  +I+ V
Sbjct: 336 ERITNDRGLDVFVDYAHTPDALVNVLRALRD-VGFTRIVTV 375