Pairwise Alignments

Query, 451 a.a., UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 454 a.a., UDP-N-acetylmuramate--alanine ligase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  173 bits (439), Expect = 9e-48
 Identities = 135/456 (29%), Positives = 214/456 (46%), Gaps = 23/456 (5%)

Query: 3   IHILGICGTFMGGVAMLARQLGHKVTGSDANVYPPMSTMLEAQGIEIIEGFDPVQLEPKP 62
           IH++GI G+ M G+A +   LG+ V GSD +    +   L   G EI  G     +    
Sbjct: 8   IHMVGIGGSGMSGIAEVLLNLGYAVHGSDMSD-SAVVRRLRKIGAEIFIGHGAGNVSDA- 65

Query: 63  DLVVIGNAMSRGNPCVEYVLNHNLRYTSGPQWLQDFLLHDRWVIAVSGTHGKTTTSSMIA 122
           +++V   A+   NP V   +   +      + L + L+  R  IA++GTHGKTTT+S+ A
Sbjct: 66  EVLVKSTAVRDDNPEVLAAVEKGIPIIPRAEMLAE-LMRLRTGIAIAGTHGKTTTTSLTA 124

Query: 123 WVLEHCGYQPGFLVGGVLGNFGISARLGESMFFVVEADEYDSAFFDKRSKFVHYHPRTLV 182
            + +  G  P  ++GG L  +G +ARLGE  + + EADE D +F       +   P   V
Sbjct: 125 AIFDVAGKDPTVIIGGRLNAYGANARLGEGEYLIAEADESDGSF-------LCLFPIVNV 177

Query: 183 MNNLEFDHADIFDNLEAIKRQFHHLVRTVPGNGRILAPKQDEALADVLQRGCWSETEFS- 241
           + N++ DH D +   + I   F   +  VP  G  +    D  +  +L +       +  
Sbjct: 178 VTNVDMDHVDFYAGQKEIDEAFVTFMNKVPFYGANVVCGDDPGVRRLLPQVKRRVVTYGF 237

Query: 242 GEQGEWQAEKIT-ADGSQFHVLLKGERVGQVNWSLVGDHNVSNALMAIAAARHVGVAPEL 300
           G+    +AE  + A+ S F V L+G R+G+V+    G HN+ NAL AI  A   G++PE 
Sbjct: 238 GKDNALRAEVTSCAETSVFTVFLRGGRLGEVHLGQPGRHNILNALAAIGVALEAGISPEH 297

Query: 301 ACEALGLFVNTKRRLELKGEINGVTVYDDFAHHPTAIELTLGGLRNKVGDKKIIAVLEPR 360
             E L  F    RR E +GE +GVTV DD+ HHP  I  TL   R+   D++++ V +P 
Sbjct: 298 CIEGLARFGGVGRRFERRGERDGVTVVDDYGHHPVEIAATLATARSVYPDRRLVVVFQPH 357

Query: 361 SATMKLGVHKETLAASLHSADSVYL---YQPSNIP---WSVEEVAKQCQQPAQVSA---- 410
             +    +  E         D + L   Y  S  P    S + +A+  +Q +        
Sbjct: 358 RFSRTQALFGE-FCKVFEPVDKLLLTEIYPASEKPIPGVSGQSLAQGIRQVSNTDVTYYQ 416

Query: 411 NMDEFVAMIAKEAQAGDQILVMSNGGFEGIHGKLLA 446
           + DE +A +    + GD +L +  G    I  + +A
Sbjct: 417 SFDEILAALPGVLRPGDVLLTLGAGSVTTIGQRYVA 452