Pairwise Alignments

Query, 330 a.a., thiamine ABC transporter substrate binding subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 343 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

 Score = 47.4 bits (111), Expect = 5e-10
 Identities = 67/268 (25%), Positives = 110/268 (41%), Gaps = 32/268 (11%)

Query: 37  WGPAPAIEKAFEAQCGCDLQFVALDDGVSILNRLRLEGSNSKADVVLGLDNNLIEEAKQT 96
           +G    I   FE   G  +++V+L  G + L+RL+ E SN  ADV LG   +    A+Q 
Sbjct: 43  YGSLDLIADEFEKDTGIKMEYVSLSSGEA-LSRLKAEQSNPSADVWLGGGIDAFISAQQD 101

Query: 97  GLLATHSVDTSKVTLPNGWSDNTFVPYDYGYFAFV------------YNKEKLANPPTSL 144
           GLL  +    +K        D  FV  D GY+  V               EK    P + 
Sbjct: 102 GLLEAYKSPNAKDI------DPLFVEED-GYWTGVSLVTIGILENTDLLSEKGLPEPQTW 154

Query: 145 KELVEKRDDLKVIYQDPRTSTPGQGLLLWMKSVYGDQAPQAWKQL---ASKTVTVTKGWS 201
            +L+      ++I  +P  S      +  +  +YG+   + W  L      T  +TK  S
Sbjct: 155 DDLITDDYKGELIASNPTVSGTAYFTICGILQMYGED--EGWNYLDKFYQNTPFLTKRGS 212

Query: 202 EAYSMFLGGEADLVLSYTTSPAYH--LIAENDARFATANFSEGHYLQVEVAAKVKSTKNG 259
              ++   GE     +Y  +P  H  +IA+++    +   ++  +    V+  V   K+ 
Sbjct: 213 GPGNLVTAGE----YAYGVAPDPHTTVIADSELPVKSVFLNKVIWWPSPVSI-VSGAKHP 267

Query: 260 ELADKFLQFILSNEFQSVIPTGNWMYPV 287
           E A  F+ + LS E Q V+   +   PV
Sbjct: 268 ENAKIFVDWCLSKEGQEVLMQASPRVPV 295