Pairwise Alignments

Query, 330 a.a., thiamine ABC transporter substrate binding subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 343 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis JJ

 Score = 50.4 bits (119), Expect = 6e-11
 Identities = 78/306 (25%), Positives = 123/306 (40%), Gaps = 42/306 (13%)

Query: 3   FQLTAVALATLCVASAASAAP----TLTVYTYDSFAAEWGPAPAIEKAFEAQCGCDLQFV 58
           F + AV +   C    AS        +TVY        +G    I   FE   G  +++V
Sbjct: 11  FCVMAVLVFAGCTEQQASNVSQEEQVVTVYV------AYGSLDLIADEFEKDTGIKMEYV 64

Query: 59  ALDDGVSILNRLRLEGSNSKADVVLGLDNNLIEEAKQTGLLATHSVDTSKVTLPNGWSDN 118
           +L  G + L+RL+ E SN  ADV LG   +    A+Q GLL  +    +K        D 
Sbjct: 65  SLSSGEA-LSRLKAEQSNPSADVWLGGGIDAFISAQQDGLLEAYKSPNAKDI------DP 117

Query: 119 TFVPYDYGYFAFV------------YNKEKLANPPTSLKELVEKRDDLKVIYQDPRTSTP 166
            FV  D GY+  V               EK    P +  +L+      ++I  +P  S  
Sbjct: 118 LFVEED-GYWTGVSLVTIGILENTDLLSEKGLPQPQTWDDLITDDYKGELIASNPTVSGT 176

Query: 167 GQGLLLWMKSVYGDQAPQAWKQL---ASKTVTVTKGWSEAYSMFLGGEADLVLSYTTSPA 223
               +  +  +YG+   + W  L      T  +TK  S   ++   GE     +Y  +P 
Sbjct: 177 AYFTICGILQMYGED--EGWNYLDKFYQNTPFLTKRGSGPGNLVTAGE----YAYGVAPD 230

Query: 224 YH--LIAENDARFATANFSEGHYLQVEVAAKVKSTKNGELADKFLQFILSNEFQSVIPTG 281
            H  LIA+++    +A  ++  +    V+  V   K+ E A  F+ + LS E Q V+   
Sbjct: 231 PHTTLIADSELPVKSAFLNKVIWWPSPVSI-VNGAKHPENAKIFVDWCLSKEGQEVLMQA 289

Query: 282 NWMYPV 287
           +   PV
Sbjct: 290 SPRVPV 295