Pairwise Alignments

Query, 530 a.a., thiamine/thiamine pyrophosphate ABC transporter permease ThiP from Vibrio cholerae E7946 ATCC 55056

Subject, 281 a.a., ABC transporter permease protein from Pseudomonas fluorescens FW300-N2E2

 Score = 70.9 bits (172), Expect = 6e-17
 Identities = 62/264 (23%), Positives = 112/264 (42%), Gaps = 17/264 (6%)

Query: 8   GFWVAAGVAT-----FVLAALAALLW------QSPPF-----NLNLIWQDAYYRHVTQFS 51
           G W+AA         F++  +A LLW      +S  F     N + I+   +Y    Q S
Sbjct: 7   GKWLAALCLVPFAIFFIVFQIAPLLWVLVNSLESEEFGWGLANFSKIFSSKFYLQAIQHS 66

Query: 52  FYQAFWSTVLSVGLAIPVAHALSQRRFPGRDLLLKLFAMTLVLPVLVAIFGLIAIYGNSG 111
              +FWS+V  + +A+  +++L +     R+ +     MT     +   F  I + G +G
Sbjct: 67  LEISFWSSVFGIVIAVLGSYSLRRVDSRLRNFVNAFANMTSNFAGVPLAFAFIILLGFNG 126

Query: 112 FLAKTLHSVGFPLPFSIYGLNGILLAHVLFNLPYASRLLLQSLEAIPSEQHKLCAHLGMS 171
            +   L   G    F++Y   G+++ +  F +P    LL  + +A+  +  +    LG S
Sbjct: 127 SITIMLKQAGIIEDFNLYSKTGLIILYTYFQIPLGVLLLYPAFDALREDWRESAELLGAS 186

Query: 172 RWQKFKWVEWPRLRQQLPHVAGLVFMLCFTSFATVMAL-GGGPKATTIELAIYQAIKFDF 230
            WQ ++ +  P L   L     ++      ++ATV AL  G      I +A   +     
Sbjct: 187 GWQFWRHIGLPVLTPALLGTFVILLANALGAYATVYALTTGNFNVLPIRIAAMVSGDISL 246

Query: 231 DLQIGALLAIWQMLLCTLLTFTLQ 254
           D  + + LA+  + L T++T   Q
Sbjct: 247 DPNLASALAVVLVALMTVVTIVHQ 270