Pairwise Alignments

Query, 530 a.a., thiamine/thiamine pyrophosphate ABC transporter permease ThiP from Vibrio cholerae E7946 ATCC 55056

Subject, 239 a.a., Sulfate transport system permease protein CysT from Pseudomonas fluorescens FW300-N2E2

 Score = 65.9 bits (159), Expect = 2e-15
 Identities = 53/212 (25%), Positives = 91/212 (42%), Gaps = 8/212 (3%)

Query: 49  QFSFYQAFWSTVLSVGLAIPVAHALSQRRFPGRDLLLKLFAMTLVLPVLVAIFGLIAIYG 108
           + SF  A ++ +++  +   +A  L +  FPGR ++  +  +   LP  VA   L A+Y 
Sbjct: 27  KLSFGTALYAAIINGVIGTLLAWVLVRYTFPGRKIIDAMMDLPFALPTAVAGIALTALYA 86

Query: 109 NSGFLAKTLHSVGFPLPFSIYGLNGILLAHVLFNLPYASRLLLQSLEAIPSEQHKLCAHL 168
            +G + +    +GF + ++     GI LA     LP+  R +   L  IP E  +  A L
Sbjct: 87  PTGLVGQFATDLGFKIAYTPL---GITLALTFVTLPFVVRTVQPVLADIPREVEEAAACL 143

Query: 169 GMSRWQKFKWVEWPRLRQQLPHVAGLVFMLCFTSFATVMALGGGPKATTIELAIYQAIKF 228
           G   WQ F+ +  P L         L F      + +V+ + G     T  L +   +K 
Sbjct: 144 GAKPWQVFRHILVPALLPAWLTGFALAFARGVGEYGSVIFIAGNMPMKTEILPLLIMVKL 203

Query: 229 D-FD----LQIGALLAIWQMLLCTLLTFTLQR 255
           D +D      IG L+ +   +L  L+    +R
Sbjct: 204 DQYDYTGATSIGVLMLVVSFVLLLLINLLQRR 235



 Score = 48.1 bits (113), Expect = 3e-10
 Identities = 58/217 (26%), Positives = 95/217 (43%), Gaps = 22/217 (10%)

Query: 315 LTSGDFWSAVSHSLQVASLASSL------ALASG-IAMLLTSRALRLKAAHRRANGVEWI 367
           LT   FW+ +S    +A+L  S       A+ +G I  LL    +R     R+   ++ +
Sbjct: 8   LTWEQFWAIISAPRVLAALKLSFGTALYAAIINGVIGTLLAWVLVRYTFPGRKI--IDAM 65

Query: 368 ATLILVTPGLVVSTGLFLLL-------RNITDV-FRLAYWIVVAVNAL--MALPYVVKTL 417
             L    P  V    L  L        +  TD+ F++AY  +    AL  + LP+VV+T+
Sbjct: 66  MDLPFALPTAVAGIALTALYAPTGLVGQFATDLGFKIAYTPLGITLALTFVTLPFVVRTV 125

Query: 418 SQPMWHLAQQYELLCASLGMSGWRRFRLVEWRALRKPLSHAFAIGFLLSMGDL-SAIALF 476
              +  + ++ E   A LG   W+ FR +   AL       FA+ F   +G+  S I + 
Sbjct: 126 QPVLADIPREVEEAAACLGAKPWQVFRHILVPALLPAWLTGFALAFARGVGEYGSVIFIA 185

Query: 477 GSQDFRT--LPLYLYQLLGSYQMDTAAVVALAMLIMS 511
           G+   +T  LPL +   L  Y    A  + + ML++S
Sbjct: 186 GNMPMKTEILPLLIMVKLDQYDYTGATSIGVLMLVVS 222