Pairwise Alignments

Query, 530 a.a., thiamine/thiamine pyrophosphate ABC transporter permease ThiP from Vibrio cholerae E7946 ATCC 55056

Subject, 574 a.a., Ferric iron ABC transporter, permease protein from Pseudomonas fluorescens FW300-N1B4

 Score = 86.3 bits (212), Expect = 3e-21
 Identities = 104/467 (22%), Positives = 186/467 (39%), Gaps = 30/467 (6%)

Query: 63  VGLAIPVAHALSQRRFPGRDLLLKLFAMTLVLPVLVAIFGLIAIYGNSGFLAKTLHSVGF 122
           V LA   A+AL +   PG+ +   +  + L+ P ++    L+ ++GN G L   L     
Sbjct: 96  VPLAYLFAYALQRTLIPGKGIWRGMSLLPLMAPSMLPGIALVYLFGNQGMLRGLLSE--- 152

Query: 123 PLPFSIYGLNGILLAHVLFNLPYASRLLLQSLEAIPSEQHKLCAHLGMSRWQKFKWVEWP 182
               +IYG  GI+L  V++  P+A  +LL +L    +      + +G S  + F+ + WP
Sbjct: 153 ----NIYGFWGIVLGEVIYTFPHALMILLSALSLADARLFDAASSMGASPAKAFRSITWP 208

Query: 183 RLRQQLPHVAGLVFMLCFTSFATVMALGGGPKATTIELAIYQAIKFDFDLQIGALLAIWQ 242
             RQ +     LVF L  T F   + +GG  +   +E   Y+A+        GAL+ +  
Sbjct: 209 ATRQAVFAAFCLVFTLTITDFGVPVVVGGDYQVLALE--AYKAVVGQQQFGRGALIGM-V 265

Query: 243 MLLCTLLTFTLQRFSHSRPMNSAASKVTERWVRDSWRAKVWDASWIVAACVLVLPPLVMV 302
           +LL  L +F +  +   R  +S + +        S        + ++  C ++L    M 
Sbjct: 266 LLLPALFSFGVDAWLRRRHGDSMSGRAQVFQPAPSMLRDACYLAIVLLICAVLLLVFGMA 325

Query: 303 VLAGLNS----KLGKVL-------TSGDFWSAVSHSLQVASLASSLALASGIAMLLTSRA 351
           V + L       L   L       T+G  W A  +S+++A   + +    G  ++ T   
Sbjct: 326 VFSSLVKFWPYNLSLSLNHYQFSDTAGGGWLAYGNSVKMALCTALI----GSVLIFTGAY 381

Query: 352 LRLKAAHRRANG--VEWIATLILVTPGLVVSTG---LFLLLRNITDVFRLAYWIVVAVNA 406
           L  K   +R     +  ++ + +  PGLV+  G    F L  N   V      ++V    
Sbjct: 382 LMEKTRGQRGLNLTLRMLSFVPMAVPGLVLGLGYVFFFNLTGNPLHVLYGTMTLLVVCTI 441

Query: 407 LMALPYVVKTLSQPMWHLAQQYELLCASLGMSGWRRFRLVEWRALRKPLSHAFAIGFLLS 466
              L     T +  +  L  ++E    SL    +R +  V        L       F+ +
Sbjct: 442 AHYLTTAQMTATTALRQLDAEFEAAALSLKAPLYRHYLRVTVPICLPALLDIVRYLFVSA 501

Query: 467 MGDLSAIALFGSQDFRTLPLYLYQLLGSYQMDTAAVVALAMLIMSVG 513
           M  +SA     S D     + +  +  +  +  AA ++  +L  S G
Sbjct: 502 MTTVSAAIFLYSPDTILAAVAVLNMDDAGNVGGAAAMSTLILFTSAG 548