Pairwise Alignments

Query, 530 a.a., thiamine/thiamine pyrophosphate ABC transporter permease ThiP from Vibrio cholerae E7946 ATCC 55056

Subject, 286 a.a., Sulphate transport system permease protein 2 from Synechococcus elongatus PCC 7942

 Score = 70.1 bits (170), Expect = 1e-16
 Identities = 49/195 (25%), Positives = 94/195 (48%), Gaps = 6/195 (3%)

Query: 58  STVLSVGLAIPVAHALSQRRFPGRDLLLKLFAMTLVLPVLVAIFGLIAIYGNSGFLAKTL 117
           S  L+    +  A A+++++FPG+ LLL +  +   +  +VA   ++ +YG +G+L   L
Sbjct: 79  SVPLNTLFGLAAAFAIARKQFPGKSLLLSVIDLPFSISPVVAGLMIVLLYGRNGWLGPLL 138

Query: 118 HSVGFPLPFSIYGLNGILLAHVLFNLPYASRLLLQSLEAIPSEQHKLCAHLGMSRWQKFK 177
            S    +   I+   G+ LA +  ++P+ +R ++ +LE I ++  +  + LG + WQ F 
Sbjct: 139 ESNDIKI---IFAWPGMALATIFVSMPFVAREVIPNLEEIGTDAEEAASTLGANGWQTFW 195

Query: 178 WVEWPRLRQQLPHVAGLVFMLCFTSFATVMALGGG--PKATTIELAIYQAIK-FDFDLQI 234
            V  P ++  + +   L        F  V  + G    K  T+ L + +A K +   L  
Sbjct: 196 RVTLPSIKWSMLYGVVLTTARALGEFGAVSVVSGSITGKTQTLPLFVEEAYKQYQTTLSY 255

Query: 235 GALLAIWQMLLCTLL 249
            A L +  + L TL+
Sbjct: 256 TAALLLGGISLVTLV 270



 Score = 36.2 bits (82), Expect = 2e-06
 Identities = 39/233 (16%), Positives = 95/233 (40%), Gaps = 11/233 (4%)

Query: 286 SWIVAACVLVLPPLVMVVLAGLNSKLGKVLTSGD--FWSAVSHSLQVASLASSLALASGI 343
           S +    ++++P   + V A      G +   GD     A+  +L +  ++  L    G+
Sbjct: 29  SLLYVGLIIIIPAANVAVQAFSEGLSGFIKNLGDRNLQEAIRLTLLMGVISVPLNTLFGL 88

Query: 344 AMLLTSRALRLKAAHRRANGVEWIATLILVTPGLVV-----STGLFLLLRNITDVFRLAY 398
           A        +        + ++   ++  V  GL++       G    L    D+  +  
Sbjct: 89  AAAFAIARKQFPGKSLLLSVIDLPFSISPVVAGLMIVLLYGRNGWLGPLLESNDIKIIFA 148

Query: 399 WIVVAVNAL-MALPYVVKTLSQPMWHLAQQYELLCASLGMSGWRRFRLVEWRALRKPLSH 457
           W  +A+  + +++P+V + +   +  +    E   ++LG +GW+ F  V   +++  + +
Sbjct: 149 WPGMALATIFVSMPFVAREVIPNLEEIGTDAEEAASTLGANGWQTFWRVTLPSIKWSMLY 208

Query: 458 AFAIGFLLSMGDLSAIALFGSQ---DFRTLPLYLYQLLGSYQMDTAAVVALAM 507
              +    ++G+  A+++         +TLPL++ +    YQ   +   AL +
Sbjct: 209 GVVLTTARALGEFGAVSVVSGSITGKTQTLPLFVEEAYKQYQTTLSYTAALLL 261