Pairwise Alignments

Query, 530 a.a., thiamine/thiamine pyrophosphate ABC transporter permease ThiP from Vibrio cholerae E7946 ATCC 55056

Subject, 535 a.a., thiamine transporter membrane protein from Sinorhizobium meliloti 1021

 Score =  348 bits (894), Expect = e-100
 Identities = 209/509 (41%), Positives = 300/509 (58%), Gaps = 12/509 (2%)

Query: 8   GFWVAAGVATFVLAALAALLWQSPPFNLNLIWQDAYYRHVTQFSFYQAFWSTVLSVGLAI 67
           G +   G+  FV  A AALL QS          DAY   +T+F+  QA  ST+L++  AI
Sbjct: 6   GAFALGGILLFVGLAGAALLGQSAGSAGGGPLFDAYIWRITRFTLLQASLSTLLAILFAI 65

Query: 68  PVAHALS-QRRFPGRDLLLKLFAMTLVLPVLVAIFGLIAIYGNSGFLAKTLHSVGFPLPF 126
           PVA AL+ Q  FPGR  +L+L A+ L LP LVA  GLI I+G  G L + L + G   P 
Sbjct: 66  PVARALARQASFPGRIWVLRLLALPLGLPALVAALGLIEIWGRQGLLNRVLSAAGLEQPV 125

Query: 127 SIYGLNGILLAHVLFNLPYASRLLLQSLEAIPSEQHKLCAHLGMSRWQKFKWVEWPRLRQ 186
           SIYGL+GIL+AHV FN+P A+RL+L  +E IP+E  +  A+LGM  +  F+++EWP +R 
Sbjct: 126 SIYGLSGILIAHVFFNMPLAARLMLAGIERIPAEYWRTSANLGMGSFATFRFIEWPVIRG 185

Query: 187 QLPHVAGLVFMLCFTSFATVMALGGGPKATTIELAIYQAIKFDFDLQIGALLAIWQMLLC 246
            LP +AGL+FMLC TSF  V+ LGGGP A+TIE+AIYQA++FDFD      L+  Q+ L 
Sbjct: 186 LLPGIAGLIFMLCATSFTLVLTLGGGPAASTIEVAIYQALRFDFDPPRAIALSALQVALT 245

Query: 247 TLLTFTLQRFSHSRPMNSAASKVTERWVRDSWRAKVWDASWIVAACVLVLPPLVMVVLAG 306
             L   L+  + +      + +   R+   S  +++ D  W++ A +LV  P   +  +G
Sbjct: 246 GALLLVLKLIAPAPLEGETSGRAIRRFDGASGLSRLADRIWLILAVILVGLPFAAIAYSG 305

Query: 307 LNSKLGKVLTSGDFWSAVSHSLQVASLASSLALASGIAMLLTSRALRLKAAHRR------ 360
             + L ++++   F  A++ S  +A +++++++A    M+ T    RL  A RR      
Sbjct: 306 SKADLVRLVSEPAFHRALAMSATIALVSATISVAIAALMIRTE---RLALAQRRPGAAPR 362

Query: 361 --ANGVEWIATLILVTPGLVVSTGLFLLLRNITDVFRLAYWIVVAVNALMALPYVVKTLS 418
             A  +    + IL+ P +V+  G FLLLR   DV R A  +VVA+NALMALP+V + L+
Sbjct: 363 LFAGTIGASTSFILLVPPVVLGAGWFLLLRPFGDVARFAPAVVVAINALMALPFVHRVLA 422

Query: 419 QPMWHLAQQYELLCASLGMSGWRRFRLVEWRALRKPLSHAFAIGFLLSMGDLSAIALFGS 478
             M   A +   L ASLG+ G+ R   ++W  LRKPL  AF+    LS+GDL A+ALFGS
Sbjct: 423 PAMATHAARTARLAASLGIGGFHRLLWIDWPGLRKPLFVAFSFAMALSLGDLGAVALFGS 482

Query: 479 QDFRTLPLYLYQLLGSYQMDTAAVVALAM 507
           +D  TLP  LY  +GSY+   AA +AL +
Sbjct: 483 EDMVTLPYLLYSRMGSYRTADAAGLALVL 511