Pairwise Alignments

Query, 530 a.a., thiamine/thiamine pyrophosphate ABC transporter permease ThiP from Vibrio cholerae E7946 ATCC 55056

Subject, 314 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score = 72.4 bits (176), Expect = 2e-17
 Identities = 64/220 (29%), Positives = 99/220 (45%), Gaps = 8/220 (3%)

Query: 34  NLNLIWQDAYYRHVTQFSFYQAFWSTVLSVGLAIPVAHALSQRRFPGRDLLLKLFAMTLV 93
           N   +  ++++  V   S   +   TV+++ LA P A+ +   R P    L K   + L 
Sbjct: 79  NYQRVLTESFFATVAGRSLVGSVIVTVITLLLAFPYAYLMV--RTPS-SALRKFLLVALF 135

Query: 94  LPV----LVAIFGLIAIYGNSGFLAKTLHSVGFPLPFSIYGLNGILLAHVLFNLPYASRL 149
           LP     +V  +G + I GN G + + L  VG P    +Y    +L   V + LP+A  +
Sbjct: 136 LPFFIGQVVRAYGWLIILGNQGMVNEALGLVGVPPIRLLYNYPAVLFGLVQYMLPFAVLM 195

Query: 150 LLQSLEAIPSEQHKLCAHLGMSRWQKFKWVEWPRLRQQLPHVAGLVFMLCFTSFATVMAL 209
           L  +L AIPSE     A LG    + F+ +  P  R  L     +V  L  T FA    L
Sbjct: 196 LAPALTAIPSELEAAAASLGAGWTRTFRHIVLPLSRPGLVGAGLVVLTLSLTDFAIPAIL 255

Query: 210 GGGPKATTIELAIYQAIKFDFDLQIGALLAIWQMLLCTLL 249
           GGG +   I  AIY       D  +GA L++  + + ++L
Sbjct: 256 GGGTQ-DFIANAIYDQFFRTSDQGMGATLSLMLVAVGSML 294



 Score = 32.7 bits (73), Expect = 2e-05
 Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 5/106 (4%)

Query: 410 LPYVVKTLSQPMWHLAQQYELLCASLGMSGWRRFRLVEWRALRKPLSHAFAIGFLLSMGD 469
           LP+ V  L+  +  +  + E   ASLG    R FR +     R  L  A  +   LS+ D
Sbjct: 189 LPFAVLMLAPALTAIPSELEAAAASLGAGWTRTFRHIVLPLSRPGLVGAGLVVLTLSLTD 248

Query: 470 LSAIALF--GSQDFRTLPLYLYQLLGSYQMDTAAVVALAMLIMSVG 513
            +  A+   G+QDF    +Y      S   D      L++++++VG
Sbjct: 249 FAIPAILGGGTQDFIANAIYDQFFRTS---DQGMGATLSLMLVAVG 291