Pairwise Alignments

Query, 530 a.a., thiamine/thiamine pyrophosphate ABC transporter permease ThiP from Vibrio cholerae E7946 ATCC 55056

Subject, 225 a.a., molybdenum ABC transporter, permease protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 77.0 bits (188), Expect = 6e-19
 Identities = 58/206 (28%), Positives = 104/206 (50%), Gaps = 8/206 (3%)

Query: 55  AFWSTVLSVGLAIPVAHALSQRRFPGRDLLLKLFAMTLVLPVLVAIFGLIAIYGNSGFLA 114
           A  + ++ + L +    AL+  +F G+ L+  L  + LVLP  V  + L+  +G+  +L 
Sbjct: 13  ALVTVLILLPLCVFAGRALAYHQFRGKSLIEALIMVPLVLPPTVVGYYLLVSFGSESWLG 72

Query: 115 KTLHSV-GFPLPFSIYGLNGILLAHVLFNLPYASRLLLQSLEAIPSEQHKLCAHLGMSRW 173
           + L +  G  L   ++  +G++LA +L N+P+A + + ++ EAIP +     A  GMS+ 
Sbjct: 73  QWLRNTFGIEL---VFHFSGLVLASILVNIPFALQPIQRAFEAIPVDVRDAAACCGMSKS 129

Query: 174 QKFKWVEWPRLRQQLPHVAGLVFMLCFTSFATVMALGG--GPKATTIELAIYQAIK-FDF 230
           +    +E P +   L     L F      F  V+ +GG    +  TI +AIY +++ FDF
Sbjct: 130 KILTRIELPMIWPGLVTALVLTFSHVLGEFGVVLMMGGNISGETKTISIAIYDSVQAFDF 189

Query: 231 DLQ-IGALLAIWQMLLCTLLTFTLQR 255
           D   I +L+ +   +    LT +L R
Sbjct: 190 DAAGIMSLILLLFAISALALTTSLSR 215



 Score = 36.2 bits (82), Expect = 1e-06
 Identities = 36/197 (18%), Positives = 80/197 (40%), Gaps = 17/197 (8%)

Query: 333 LASSLALASGIAMLLTSRALRLKAAHRRANGVEWIATLILVTPGLVVSTGLFLLLRNITD 392
           L+  LAL + + +L          A+ +  G   I  LI+V   L  +   + LL +   
Sbjct: 8   LSGKLALVTVLILLPLCVFAGRALAYHQFRGKSLIEALIMVPLVLPPTVVGYYLLVSFGS 67

Query: 393 VFRLAYWI--------------VVAVNALMALPYVVKTLSQPMWHLAQQYELLCASLGMS 438
              L  W+              +V  + L+ +P+ ++ + +    +        A  GMS
Sbjct: 68  ESWLGQWLRNTFGIELVFHFSGLVLASILVNIPFALQPIQRAFEAIPVDVRDAAACCGMS 127

Query: 439 GWRRFRLVEWRALRKPLSHAFAIGFLLSMGDLSAIALFG---SQDFRTLPLYLYQLLGSY 495
             +    +E   +   L  A  + F   +G+   + + G   S + +T+ + +Y  + ++
Sbjct: 128 KSKILTRIELPMIWPGLVTALVLTFSHVLGEFGVVLMMGGNISGETKTISIAIYDSVQAF 187

Query: 496 QMDTAAVVALAMLIMSV 512
             D A +++L +L+ ++
Sbjct: 188 DFDAAGIMSLILLLFAI 204