Pairwise Alignments

Query, 530 a.a., thiamine/thiamine pyrophosphate ABC transporter permease ThiP from Vibrio cholerae E7946 ATCC 55056

Subject, 283 a.a., sulfate ABC transporter, permease protein CysT (NCBI) from Rhodospirillum rubrum S1H

 Score = 66.6 bits (161), Expect = 1e-15
 Identities = 66/261 (25%), Positives = 111/261 (42%), Gaps = 11/261 (4%)

Query: 7   LGFWVAAGVATFVLAALAALLWQSPPFNLNLIWQDAYYRHVT---QFSFYQAFWSTVLSV 63
           LGF +A  +   VL  LAA++ ++        W  A         + SF  A  +  +++
Sbjct: 23  LGFTLAY-LGLLVLLPLAAVVIKAASLGPADFWAIATAPRTLAALRLSFGAALLAAAINM 81

Query: 64  GLAIPVAHALSQRRFPGRDLLLKLFAMTLVLPVLVAIFGLIAIYGNSGFLAKTLHSVGFP 123
              + VA  L +  FPGR +L  L  +   LP  VA   L  +Y N+G++ + L  +G  
Sbjct: 82  VFGLLVAWVLVRYDFPGRRILDALVDLPFALPTAVAGIALTGLYANNGWIGQYLEPLGLK 141

Query: 124 LPFSIYGLNGILLAHVLFNLPYASRLLLQSLEAIPSEQHKLCAHLGMSRWQKFKWVEWPR 183
           + F+     G+++A     LP+  R +   L  +  E  ++ A LG  RW  F+ V  P 
Sbjct: 142 VAFA---PAGVVVALTFVGLPFVVRTVQPVLADLEREAEEVAATLGAGRWDTFRRVLMPA 198

Query: 184 LRQQLPHVAGLVFMLCFTSFATVMALGGG-PKATTIE--LAIYQAIKFDFDLQIGALLAI 240
           L   L     L F      + +V+ + G  P  + I   L + +  +FD+         +
Sbjct: 199 LAPALLTGFALSFARGVGEYGSVIFIAGNIPMVSEIAPLLIVIKLEEFDYRGATAVAAVM 258

Query: 241 WQMLLCTLLTFT-LQRFSHSR 260
             +    LL    LQ +S +R
Sbjct: 259 LALSFALLLAINLLQSWSRAR 279



 Score = 47.8 bits (112), Expect = 5e-10
 Identities = 64/250 (25%), Positives = 100/250 (40%), Gaps = 30/250 (12%)

Query: 293 VLVLPPLVMVVLAGLNSKLGKVLTSGDFWSAVSHSLQVASLASSLA---LASGIAM---- 345
           +LVL PL  VV+   +      L   DFW+  +    +A+L  S     LA+ I M    
Sbjct: 32  LLVLLPLAAVVIKAAS------LGPADFWAIATAPRTLAALRLSFGAALLAAAINMVFGL 85

Query: 346 LLTSRALRLKAAHRRANGVEWIATLILVTPGLVVSTGLFLLLRNITDV--------FRLA 397
           L+    +R     RR   ++ +  L    P  V    L  L  N   +         ++A
Sbjct: 86  LVAWVLVRYDFPGRRI--LDALVDLPFALPTAVAGIALTGLYANNGWIGQYLEPLGLKVA 143

Query: 398 Y---WIVVAVNALMALPYVVKTLSQPMWHLAQQYELLCASLGMSGWRRFRLVEWRALRKP 454
           +    +VVA+   + LP+VV+T+   +  L ++ E + A+LG   W  FR V   AL   
Sbjct: 144 FAPAGVVVALT-FVGLPFVVRTVQPVLADLEREAEEVAATLGAGRWDTFRRVLMPALAPA 202

Query: 455 LSHAFAIGFLLSMGDLSAIALFGS---QDFRTLPLYLYQLLGSYQMDTAAVVALAMLIMS 511
           L   FA+ F   +G+  ++              PL +   L  +    A  VA  ML +S
Sbjct: 203 LLTGFALSFARGVGEYGSVIFIAGNIPMVSEIAPLLIVIKLEEFDYRGATAVAAVMLALS 262

Query: 512 VGWFYVIERL 521
                 I  L
Sbjct: 263 FALLLAINLL 272