Pairwise Alignments

Query, 530 a.a., thiamine/thiamine pyrophosphate ABC transporter permease ThiP from Vibrio cholerae E7946 ATCC 55056

Subject, 272 a.a., Probable sulfate-transport integral membrane protein ABC transporter CysW from Mycobacterium tuberculosis H37Rv

 Score = 60.8 bits (146), Expect = 6e-14
 Identities = 58/262 (22%), Positives = 115/262 (43%), Gaps = 23/262 (8%)

Query: 11  VAAG-VATFVLAALAALLWQS--PPFNLNLIWQDAYYRHVTQFSFYQAFWSTVLSVGLAI 67
           VA G V   ++  +A +LW++  P F         +Y  ++  +   A   ++L V + +
Sbjct: 14  VALGYVFVLLIVPVALILWRTFEPGFG-------QFYAWISTPAAISALNLSLLVVAIVV 66

Query: 68  PV--------AHALSQRRFPGRDLLLKLFAMTL-VLPVLVAIFGLIAIYGNSGFLAKTLH 118
           P+        A  L++ RF G+ +L  +  +   V PV+V +  LI ++G++G L     
Sbjct: 67  PLNVIFGVTTALVLARNRFRGKGVLQAIIDLPFAVSPVIVGV-SLILLWGSAGALGFVEQ 125

Query: 119 SVGFPLPFSIYGLNGILLAHVLFNLPYASRLLLQSLEAIPSEQHKLCAHLGMSRWQKFKW 178
            +GF +   I+GL GI+L  +    P+  R +   L  + ++Q +  A LG   WQ F  
Sbjct: 126 DLGFKI---IFGLPGIVLGSMFVTCPFVVREVEPVLHELGTDQEQAAATLGSGWWQTFWR 182

Query: 179 VEWPRLRQQLPHVAGLVFMLCFTSFATVMALGGGPKATTIELAIYQAIKFDFDLQIGALL 238
           +  P +R  L +   L        +  V+ +      T+  L +  + ++    + GA  
Sbjct: 183 ITLPSIRWGLTYGIVLTVARTLGEYGAVIIVSSNLPGTSQTLTLLVSDRYHRGAEYGAYA 242

Query: 239 AIWQMLLCTLLTFTLQRFSHSR 260
               ++  +++   +Q    +R
Sbjct: 243 LSTLLMAVSVVVLIVQMVLDAR 264



 Score = 36.6 bits (83), Expect = 1e-06
 Identities = 36/195 (18%), Positives = 87/195 (44%), Gaps = 9/195 (4%)

Query: 293 VLVLPPLVMVVLAGLNSKLGKV---LTSGDFWSAVSHSLQVASLASSLALASGI--AMLL 347
           VL++ P+ +++        G+    +++    SA++ SL V ++   L +  G+  A++L
Sbjct: 21  VLLIVPVALILWRTFEPGFGQFYAWISTPAAISALNLSLLVVAIVVPLNVIFGVTTALVL 80

Query: 348 TSRALRLKAAHRRANGVEWIATLILVTPGLVVSTGLFLLLRNITDV--FRLAYWI--VVA 403
                R K   +    + +  + ++V   L++  G    L  +     F++ + +  +V 
Sbjct: 81  ARNRFRGKGVLQAIIDLPFAVSPVIVGVSLILLWGSAGALGFVEQDLGFKIIFGLPGIVL 140

Query: 404 VNALMALPYVVKTLSQPMWHLAQQYELLCASLGMSGWRRFRLVEWRALRKPLSHAFAIGF 463
            +  +  P+VV+ +   +  L    E   A+LG   W+ F  +   ++R  L++   +  
Sbjct: 141 GSMFVTCPFVVREVEPVLHELGTDQEQAAATLGSGWWQTFWRITLPSIRWGLTYGIVLTV 200

Query: 464 LLSMGDLSAIALFGS 478
             ++G+  A+ +  S
Sbjct: 201 ARTLGEYGAVIIVSS 215