Pairwise Alignments

Query, 530 a.a., thiamine/thiamine pyrophosphate ABC transporter permease ThiP from Vibrio cholerae E7946 ATCC 55056

Subject, 235 a.a., molybdate ABC transporter, inner membrane subunit (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 69.7 bits (169), Expect = 1e-16
 Identities = 62/194 (31%), Positives = 87/194 (44%), Gaps = 5/194 (2%)

Query: 58  STVLSVGLAIPVAHALSQRRFPGRDLLLKLFAMTLVLPVLVAIFGLIAIYGNSGFLAKTL 117
           +TV+S  L I  A  +++R FPGR  +  L A+ LVLP  V  + LI + G  G L   L
Sbjct: 28  ATVVSSVLGILTAWCIARRPFPGRTWVDALCALPLVLPPTVIGYYLILLVGRRGLLGPWL 87

Query: 118 HSVGFPLPFSIYGLNGILLAHVLFNLPYASRLLLQSLEAIPSEQHKLCAHLGMSRWQKFK 177
              G  L FS     G ++A  +   P   +    +LEA+          LG S W+ F 
Sbjct: 88  AEFGINLMFS---WEGAVVAATVVVFPLIYKSARAALEAVDHNLENAARTLGASEWKVFL 144

Query: 178 WVEWPRLRQQLPHVAGLVFMLCFTSF-ATVMALGGGPKAT-TIELAIYQAIKFDFDLQIG 235
            V  P   + +     L F      F AT+M  G  P  T T+ LAIY A +   D Q  
Sbjct: 145 RVSLPLAWRGILAGVMLAFARGMGEFGATLMIAGNLPGRTQTLSLAIYSAFQAGDDAQAL 204

Query: 236 ALLAIWQMLLCTLL 249
           AL+ +  +L   +L
Sbjct: 205 ALVIVTSLLCMGVL 218



 Score = 33.9 bits (76), Expect = 7e-06
 Identities = 52/213 (24%), Positives = 84/213 (39%), Gaps = 33/213 (15%)

Query: 322 SAVSHSLQVASLASSLALASGIAMLLTSRALRLKAAHRRANGVEWIATLI---LVTPGLV 378
           S +  +L+VA +A+ ++   GI   LT+  +    A R   G  W+  L    LV P  V
Sbjct: 16  SVILLTLKVAGIATVVSSVLGI---LTAWCI----ARRPFPGRTWVDALCALPLVLPPTV 68

Query: 379 VSTGLFLLL--RNITDVFRLAYWI--------VVAVNALMALPYVVKTLSQPMWHLAQQY 428
           +   L LL+  R +   +   + I         V    ++  P + K+    +  +    
Sbjct: 69  IGYYLILLVGRRGLLGPWLAEFGINLMFSWEGAVVAATVVVFPLIYKSARAALEAVDHNL 128

Query: 429 ELLCASLGMSGWRRFRLVE----WRALRKPLSHAFAIGFLLSMGDLSAIALFGSQ---DF 481
           E    +LG S W+ F  V     WR +   +  AFA G    MG+  A  +         
Sbjct: 129 ENAARTLGASEWKVFLRVSLPLAWRGILAGVMLAFARG----MGEFGATLMIAGNLPGRT 184

Query: 482 RTLPLYLYQLL--GSYQMDTAAVVALAMLIMSV 512
           +TL L +Y     G      A V+  ++L M V
Sbjct: 185 QTLSLAIYSAFQAGDDAQALALVIVTSLLCMGV 217