Pairwise Alignments

Query, 530 a.a., thiamine/thiamine pyrophosphate ABC transporter permease ThiP from Vibrio cholerae E7946 ATCC 55056

Subject, 536 a.a., thiamine/thiamine pyrophosphate ABC transporter permease ThiP from Klebsiella michiganensis M5al

 Score =  445 bits (1144), Expect = e-129
 Identities = 250/525 (47%), Positives = 340/525 (64%), Gaps = 7/525 (1%)

Query: 3   RTPQLGFWVAAGVATFV------LAALAALLWQSPPFNLNLIWQDAYYRHVTQFSFYQAF 56
           R P    W+  GV   +      LAA  AL + +P     ++  D+Y  HV +FSF+QAF
Sbjct: 5   RQPLAFGWLLPGVTAAIILVVVALAAFLALWFSAPEAAWGVLIGDSYLWHVVRFSFWQAF 64

Query: 57  WSTVLSVGLAIPVAHALSQRRFPGRDLLLKLFAMTLVLPVLVAIFGLIAIYGNSGFLAKT 116
            S + SV  AI +A AL +RRFPGR LLL+L AMTL+LPVLVA+FG++++YG  G+LA+ 
Sbjct: 65  LSALFSVLPAIFLARALYRRRFPGRTLLLRLCAMTLILPVLVAVFGILSVYGRQGWLAEL 124

Query: 117 LHSVGFPLPFSIYGLNGILLAHVLFNLPYASRLLLQSLEAIPSEQHKLCAHLGMSRWQKF 176
            ++ G+   FS YGL GILLAHV FN+P A+RLLLQ+LE IP EQ ++ A LGM  +  F
Sbjct: 125 FNAFGWQWSFSPYGLQGILLAHVFFNMPMATRLLLQTLENIPGEQRQIAAQLGMRGYVFF 184

Query: 177 KWVEWPRLRQQLPHVAGLVFMLCFTSFATVMALGGGPKATTIELAIYQAIKFDFDLQIGA 236
           + VEWP LR+Q+  VA L+FMLCF SFATV++LGGGP+ATTIELAIYQA+ FD+D    A
Sbjct: 185 RLVEWPWLRRQIAPVAALIFMLCFASFATVLSLGGGPRATTIELAIYQALNFDYDPGRAA 244

Query: 237 LLAIWQMLLCTLLTFTLQRFSHSRPMNSAASKVTERWVRDSWRAKVWDASWIVAACVLVL 296
           +LA+ QM+ C  L    QR S +  +  A++    R   D   +++ D + I AA +L+L
Sbjct: 245 MLALIQMICCLGLVLLSQRLSKALAI-GASNIHGWRDPDDRLHSRLSDFALITAALLLLL 303

Query: 297 PPLVMVVLAGLNSKLGKVLTSGDFWSAVSHSLQVASLASSLALASGIAMLLTSRALRLKA 356
           PPL+ V+L GLNS L +VL     W A+  SL++A  A  L++   + +L +SR LR + 
Sbjct: 304 PPLLAVILDGLNSNLFRVLHQPALWQALGTSLRIALAAGLLSVILTMMLLWSSRELRARR 363

Query: 357 AHRRANGVEWIATLILVTPGLVVSTGLFLLLRNITDVFRLAYWIVVAVNALMALPYVVKT 416
                  +E    LIL  PG+V++TG FLLL N   +   A  IV+  NALMA+PY +K 
Sbjct: 364 RPLAGQALELSGMLILAMPGIVLATGFFLLLNNSVGLPESADGIVIFTNALMAIPYALKV 423

Query: 417 LSQPMWHLAQQYELLCASLGMSGWRRFRLVEWRALRKPLSHAFAIGFLLSMGDLSAIALF 476
           L  PM  +A +Y  LC SLGM G+ R R+VE RAL++PL+ A A   +LS+GD   +ALF
Sbjct: 424 LENPMRDIAARYGTLCQSLGMHGFTRLRVVELRALKRPLAQALAFACVLSIGDFGVVALF 483

Query: 477 GSQDFRTLPLYLYQLLGSYQMDTAAVVALAMLIMSVGWFYVIERL 521
           G++DFRTLP YLYQ +GSY+    AV AL +L++    F VIE+L
Sbjct: 484 GNEDFRTLPFYLYQQIGSYRSQDGAVTALLLLLLCFLLFSVIEKL 528