Pairwise Alignments

Query, 244 a.a., thiamine ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 378 a.a., polyamine ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  152 bits (383), Expect = 1e-41
 Identities = 85/216 (39%), Positives = 123/216 (56%)

Query: 23  EFDLNVADGDIVALMGPSGAGKSTLLSLVAGFIEPVSGSIKVNDQSVLGLAPYQRPFSML 82
           +  L +  G+I AL+G SG+GKSTLL ++AGF  P SG I ++ + +  L PY+RP +M+
Sbjct: 38  DVSLTINKGEIFALLGGSGSGKSTLLRMLAGFERPTSGRIYLDGEDITDLPPYERPINMM 97

Query: 83  FQEHNLFAHLTVRENIGLGLHPGLKLNAEQKQQVVDAAQQVGIADYLDRLPEQLSGGQRQ 142
           FQ + LF H+TV +NI  GL       AE +Q+V +  + V +  Y  R P QLSGGQRQ
Sbjct: 98  FQSYALFPHMTVAQNIAFGLKQDKLPKAEIEQRVQEMLKLVHMEQYGKRKPHQLSGGQRQ 157

Query: 143 RVALARCFVQPNPIWLLDEPFSALDPLLREEMLALVKQLASERQRTVVMVTHHLSDARAI 202
           RVALAR   +   + LLDEP  ALD  LR +M   V ++      T VMVTH   +A  +
Sbjct: 158 RVALARSLAKRPKLLLLDEPMGALDKKLRTQMQLEVVEILERVGVTCVMVTHDQEEAMTM 217

Query: 203 ASQIAFLSQGKVKVVSDCQAVTAQHPHPELAQFVAA 238
           A +I+ +S G +        +        +A+F+ +
Sbjct: 218 AGRISIMSDGWIAQTGSPMDIYESPNSRMIAEFIGS 253