Pairwise Alignments

Query, 447 a.a., metalloprotease PmbA from Vibrio cholerae E7946 ATCC 55056

Subject, 480 a.a., Predicted Zn-dependent proteases and their inactivated homologs from Pseudomonas stutzeri RCH2

 Score = 71.6 bits (174), Expect = 5e-17
 Identities = 96/440 (21%), Positives = 178/440 (40%), Gaps = 45/440 (10%)

Query: 23  ELAAASSDAAEVAITKSTGLSVSTRMCEVENVEFNSDGALGITVYRGQRKGSASTSDLSE 82
           ELA    DAA++        S       V+   F+ +  +G+    G++ G A ++ ++ 
Sbjct: 29  ELAGPGVDAADLYFQDQVSESWVLEDGIVKEGGFHLEQGVGVRALSGEKTGFAYSNAITA 88

Query: 83  KAIRQTVLAALDIAQYTSADPYAGPAPKELMVQEIPDLDLFHPDEPNPDVAAQIAI---- 138
            A+RQ   AA  IA+       +G   +  ++ +     L+  D P   ++    +    
Sbjct: 89  DALRQAAQAARSIAR-------SGQQGQVKVLSKAAFAPLYSRDNPLDGLSRAEKVELLK 141

Query: 139 ---AAERAALGYSKKIKQSDGGSYDSHYGVRVYGNSHGLLASYASSRHSISCSVIGEGRN 195
               A RA     K++  S  G ++    + V G   G+ A+        + SVI E +N
Sbjct: 142 RIDVATRALDPRIKQVTVSLAGVWEH---ILVAGMDGGM-ATDIRPLVRFNVSVIVE-QN 196

Query: 196 GEMERD---------YSYTVARHRDDLWTPESVGLQAAENTVSRLDPQKLKTGQFPVMFA 246
           G  ER          Y Y +   R   +  E     A    +  L+      G  PV+  
Sbjct: 197 GRRERGGQGGGGRTGYQYFLTEDRAMGYARE-----ALRQALVNLEAVPAPAGSLPVVLG 251

Query: 247 ADVATGLIGHLVMAISGGNLYRK-SSFLLDHLGKTILPTWFNISERPHVMRGLASSPFDS 305
              +  L+   V     G+  RK SS     +G+ +  +   I +   +     S   D 
Sbjct: 252 PGWSGVLLHEAVGHGLEGDFNRKGSSAYSGRIGEQVASSLCTIVDDGTLADRRGSLSVDD 311

Query: 306 EGVRTQDLEIITDGVLATYLLTSYAARKMNMTPTGHA----------GGIHNWYVKSTGQ 355
           EG  TQ   +I +G+L  Y+     AR M + PTG+             + N Y+ +   
Sbjct: 312 EGTPTQCTTLIENGILKGYIQDKLNARLMGVAPTGNGRRESYAHLPMPRMTNTYMLAGES 371

Query: 356 NYQQMLKELGTGLLVTEVMGQGVNVVTGDYSRGAA-GFWVENGEIKYPVSEITIAGNLKQ 414
           + Q++++ +  G+    + G  V++ +G +    +  + +E+G+I  PV   T+ GN  +
Sbjct: 372 DPQEIIRSVKKGIYCASLGGGQVDITSGKFVFSTSEAYLIEDGKITAPVKGATLIGNGPE 431

Query: 415 MLQQIVAVGSDIETRSQIQT 434
           ++ ++  VG+D+   S + T
Sbjct: 432 VMNRVSMVGNDLALDSGVGT 451