Pairwise Alignments

Query, 447 a.a., metalloprotease PmbA from Vibrio cholerae E7946 ATCC 55056

Subject, 446 a.a., putative modulator of DNA gyrase from Synechococcus elongatus PCC 7942

 Score = 91.7 bits (226), Expect = 4e-23
 Identities = 103/461 (22%), Positives = 197/461 (42%), Gaps = 51/461 (11%)

Query: 6   RVALQRQELEAAVAKALELAAASSDAAEVAITKSTGLSVSTRMCEVENVEFNSDGALGIT 65
           R+ + + ++  +  +   +     D  +V  ++ +G++V           +N  G +G+T
Sbjct: 18  RLGIAQYDVSGSAVEETSVQVEKGDPKQVKASQRSGVTVRV---------WNEQGQVGVT 68

Query: 66  VYRGQRKGSASTSDLSEKAIR-QTVLAALDIAQYTSADPYAGPAPKELMVQEIPDLDLFH 124
                   S S SDL    +  QT L A        A  ++  A   L   EIP+ D+  
Sbjct: 69  --------STSESDLPGLELALQTALEASQFGIREHAPDFSPEATVPLEPLEIPNYDI-- 118

Query: 125 PDEPNPDVAAQIAIAAER--------AALGYSKKIKQSDGGSYDSHYGVRVYGNSHGLLA 176
             E  P++ A +A A ++        AA+ Y+   ++   G          Y NS G L 
Sbjct: 119 --EAVPELIAALAEAEQQLLASHPAIAAVPYNGLARRRSEG---------FYLNSAGALR 167

Query: 177 SYASSRHSISCSVIGEGRNGEMERDYSYTVARHRDDLWTPESVGLQAAENTVSRLDPQKL 236
           S   S  S+      E  + +     ++ +A    DL     V  + AE T+S LD + +
Sbjct: 168 SEKGSYASLYLYSKTEQADRKPRSAGAFRMAHRLADLDFSGCV-TETAEKTISHLDYRPI 226

Query: 237 KTGQFPVMFAADVATGLIGHLVMAISGGN-LYRKSSFLLDHLGKTILPTWFNISERPHVM 295
            +G++ V F+ +    L+G      +  + L R+S    + LG  I     N+ +     
Sbjct: 227 TSGKYLVCFSPEAFLQLLGAFSNLFNAQSVLDRQSLSTPESLGTAIASPLLNLYDDARHP 286

Query: 296 RGLASSPFDSEGVRTQDLEIITDGVLATYLLTSYAARKMNMTPTGHAG-------GIHNW 348
             + ++ FD EG  T+ L +I  GVL  +L ++  A+++  +PTGHA          H  
Sbjct: 287 SNVGATAFDGEGTPTRRLPLIEAGVLKNFLHSAGTAKRLGASPTGHANLGAKVTVSPHFG 346

Query: 349 YVKSTGQNYQQMLKELGTGLLVTEV--MGQGVNVVTGDYSRGAAGFWVENGEIKYPVSEI 406
            V++     +  L    + +L+ ++  +  GV  + G +S    G+ V  G+ +  +   
Sbjct: 347 VVEAAEARSELSLDTAESVILIDDLQALHAGVQSLQGSFSLPFDGWLVNQGD-RVSIESA 405

Query: 407 TIAGNLKQMLQQIVAVGSDIETRSQIQTGSILIESMKVAGE 447
           T+AG+ +++L+ IV V +  +      + ++ +E + + GE
Sbjct: 406 TVAGDFRELLRNIVQVDAIAQITPGGISPAVWVEGLSITGE 446