Pairwise Alignments

Query, 447 a.a., metalloprotease PmbA from Vibrio cholerae E7946 ATCC 55056

Subject, 482 a.a., peptidase U62, modulator of DNA gyrase (RefSeq) from Shewanella loihica PV-4

 Score = 67.4 bits (163), Expect = 1e-15
 Identities = 87/400 (21%), Positives = 156/400 (39%), Gaps = 32/400 (8%)

Query: 51  VENVEFNSDGALGITVYRGQRKGSASTSDLSEKAIRQTVLAALDIAQYTSADPYAGPAPK 110
           V+   F+ +  +G+    G++ G A   +++  A+   V AA  I+        AG + +
Sbjct: 55  VKEGSFHIERGVGVRAISGEKTGFAYADEITPAALSAAVEAARGISA-------AGNSGR 107

Query: 111 ELMVQEIPDLDLFHPDEPNPDVAAQIAIAAERAALGYSKKIKQSDGGSYDSHYGVR---V 167
               ++     L+   +P   +     IA  + A  Y + +         S  GV    +
Sbjct: 108 VQAWKQHKVTPLYQSADPIAAMEEVKKIALLKQADAYVRSLDPRIIQVVISLSGVHEEIL 167

Query: 168 YGNSHGLLASYASSRHSISCSVIGEGRNGEMERDYSYTVARHR---------DDLWTPES 218
              S G LA+        +CSV+ E + G+ ER  S    RH          D L +  +
Sbjct: 168 VAASDGTLAADIRPLVRFNCSVVLE-QEGKRERGASGGGGRHDYQVFFESGDDGLPSCFA 226

Query: 219 VGLQAAENTVSRLDPQKLKTGQFPVMFAADVATGLIGHLVMAISGGNLYRKSSFLLDHL- 277
              +A       L       G+ PV+  A     L+   V     G+  RK S     L 
Sbjct: 227 FAREAVRQASVNLTAIDAPAGEMPVVLGAGWPGVLLHEAVGHGLEGDFNRKGSSAFSGLV 286

Query: 278 GKTILPTWFNISERPHVMRGLASSPFDSEGVRTQDLEIITDGVLATYLLTSYAARKMNMT 337
           G+ +  +   + +   +     S   D EGV TQ   +I DG+L  Y+      R M   
Sbjct: 287 GQQVASSLVTVVDDGTLENRRGSLSIDDEGVPTQKTVLIQDGILKGYMQDKLNGRLMGQA 346

Query: 338 PTGHA----------GGIHNWYVKSTGQNYQQMLKELGTGLLVTEVMGQGVNVVTGDYSR 387
            TG+             + N Y+++   + + ++K +  G+      G  V++ +G +  
Sbjct: 347 STGNGRRESYAHLPMPRMTNTYMEAGDSSPEDIIKSVDKGIYAPNFGGGQVDITSGKFVF 406

Query: 388 GAA-GFWVENGEIKYPVSEITIAGNLKQMLQQIVAVGSDI 426
            A+  + +E GEI   +   T+ GN  + + Q+  VG+D+
Sbjct: 407 SASEAYLIEKGEITQAIKGATLIGNGPEAMGQLSMVGNDL 446