Pairwise Alignments

Query, 286 a.a., RNase adaptor protein RapZ from Vibrio cholerae E7946 ATCC 55056

Subject, 285 a.a., Hypothetical ATP-binding protein UPF0042, contains P-loop from Pseudomonas fluorescens FW300-N2E2

 Score =  273 bits (697), Expect = 4e-78
 Identities = 140/286 (48%), Positives = 196/286 (68%), Gaps = 7/286 (2%)

Query: 1   MRLIVVSGQSGAGKSVALRVLEDLGYYCVDNLPVSLLTAFIQSV----QGSQQNVAVSID 56
           MR+I+VSG+SG+GKS AL VLED GYYC+DNLP  LL    +      + +Q  VAVSID
Sbjct: 1   MRMIIVSGRSGSGKSTALNVLEDSGYYCIDNLPAGLLPELAERALIHTELAQPLVAVSID 60

Query: 57  IRNLPKEPSLVQDVLDQLKQNN-DVSMLFLDASKETLLKRYSETRRIHPLSLSQSKPSLA 115
            RNLP   S   ++L++++  +    +L+LDA +ETLLKR+SETRR HPLS   +  SLA
Sbjct: 61  ARNLPSHLSRFPELLEEVRSRHIQCDVLYLDADEETLLKRFSETRRRHPLS--NANRSLA 118

Query: 116 QAIELEKQLLGPLKEQADLLLDSSNQSLHELSETVRMRIEGRERKDLVMVFQSFGFKYGL 175
           +AIE E QLLGP+ + ADL +++++ +L++L +T+++R+  +       + +SFGFK G+
Sbjct: 119 EAIEDESQLLGPIADLADLKVNTTHLNLYQLRDTIKLRLLNQPEPGTAFLVESFGFKRGM 178

Query: 176 PTDADYVFDVRFLPNPHWEPDLRPLTGLDAPIKSFLEGHSEVMELKQQIQKFFEYWLPML 235
           P DAD VFDVR LPNP+W+P+LR  +GLD P+  +L    +V E+ Q I  +   WLP  
Sbjct: 179 PVDADLVFDVRCLPNPYWKPELRAQSGLDQPVIDYLAAQPDVEEMYQDISSYLLKWLPRF 238

Query: 236 EKNNRSYLTIAIGCTGGKHRSVYLTQQLGEYFAQLGHQVQLRHTSL 281
             +NR+Y+TIAIGCTGG HRSVYLT++LG+   Q    VQ+RH  L
Sbjct: 239 AASNRAYVTIAIGCTGGHHRSVYLTERLGQLLQQSLKNVQVRHRDL 284