Pairwise Alignments

Query, 286 a.a., RNase adaptor protein RapZ from Vibrio cholerae E7946 ATCC 55056

Subject, 285 a.a., Predicted P-loop-containing kinase from Pseudomonas stutzeri RCH2

 Score =  250 bits (639), Expect = 2e-71
 Identities = 129/286 (45%), Positives = 188/286 (65%), Gaps = 7/286 (2%)

Query: 1   MRLIVVSGQSGAGKSVALRVLEDLGYYCVDNLPVSLLTAFIQSV----QGSQQNVAVSID 56
           MRLI+VSG+SG+GKS AL VLED G+YC+DNLP  LL    +      +     VAVSID
Sbjct: 1   MRLIIVSGRSGSGKSTALNVLEDNGFYCIDNLPAGLLPELAERALLHTELLHPQVAVSID 60

Query: 57  IRNLPKEPSLVQDVLDQLKQNNDV-SMLFLDASKETLLKRYSETRRIHPLSLSQSKPSLA 115
            RNLP +     ++L++++  + +  +L+LDA  ETLLKR+SETRR HPL+      SLA
Sbjct: 61  ARNLPSQLKRFPELLEEVRARHILCDVLYLDADDETLLKRFSETRRRHPLT--NENRSLA 118

Query: 116 QAIELEKQLLGPLKEQADLLLDSSNQSLHELSETVRMRIEGRERKDLVMVFQSFGFKYGL 175
           +AI  E+ LL  + + ADL +D+++ +L++L + +++R+  +       + +SFGFK G+
Sbjct: 119 EAIHDEELLLAAIIDHADLKIDTTHLNLYQLRDVLKLRLLNKPEPGTAFLIESFGFKRGM 178

Query: 176 PTDADYVFDVRFLPNPHWEPDLRPLTGLDAPIKSFLEGHSEVMELKQQIQKFFEYWLPML 235
           P DAD VFDVR LPNP+W+ +LR  +GLD P+  +L   ++V E+ Q I  +   WLP  
Sbjct: 179 PVDADLVFDVRCLPNPYWKAELRDFSGLDQPVIDYLAAQADVEEMFQDIHAYLSKWLPRF 238

Query: 236 EKNNRSYLTIAIGCTGGKHRSVYLTQQLGEYFAQLGHQVQLRHTSL 281
             +NR+Y+TIAIGCTGG HRSVYL ++LG+   +    +Q+RH  L
Sbjct: 239 AASNRAYVTIAIGCTGGHHRSVYLAERLGQALREPLKNLQVRHRDL 284